Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00246 ATGAAATTACCATTTTCAGCTTCAGCTAttgctttttgttttctttgtgaATTGTTATTCATTGTTGTTTGTAATTCACAAGTTGCTGAGGAAATGTATAGATTTGGTAGGAACTCTCATGTAAGCTATAAGTATGATAGAATTGATGAAGTTCAGAAACAATGTGTGTCTGTTTTATCTGCTTCATCTGAATTGAGATTTGGATATAGTGATGTTATTGGTATGAAAGGAGAGCTTTCTTTTGTTAATGGGGATTGGATTCAGGAGGATGGTAAGTTTCCTATTATGCCATTTGATGATAGGAATGGAAGTTTTTCGGGGATTTTGTCGGGGGATCGGCGTAGTAGTCCGATGAAATTGGTTTCTTTTGGTGTAACTGATGTTGATCATACTCATCGGTTGAAGAAATCGATCCCTATCAATGGTTTCATGGTGATGGGAATTACTAGAGATGGTAGTTTTATGGACAGTGTGTATGGTGATGAGAATCTAGATTTTCGGTTATGGCCCGGACATTCTCAGATTTCAATTCCCTTTCAAGGGATTTACACTGAATCGAAGAAAAACGGTGGTGAAAGGGTGTTGTGTTTGTTAGGGAATACTATGCTTCCAACTCGAGAGACCAATCCTGCCAATCCTTGGGAGTGGATGAAGAATCCTGGTGATGTACCTATGTCAGAAGACGATCAAATTCTGCTCGTTCTTCGTTATCCGTTGACATTCACTTTAACAAATAGGATGATAACCGGAGAGTTAAGAAGTTTGAACCGTGATTCGAATCCTAAATACTTTGATGTGGTTCACATATCATCGCAGTTGGGTAGCTCAGCTAAGTACACATTCAGCTCACAAAATATTGTATCCAAAGCATGCAATCCATACCCGTATAAAGATAACATGACAGATAATGTCATTAGTGTCTACAAAGGGACAAGGTTTTGTGAAATCCTTGAAGAAGTTACTAGAGATAAACCTTTATCTGTTGTGCCGAACTGGAGATGCAACGGTACAGATGATTTCTGCAGTAAATTAGGTCCTTTTTCATCGGACGAGGCAATCAAATCAACACATGGAGGCTTTCAAGATGTTAAACTTTATATGCAAGATGTTATCTGTGAGCAAGAAGCTGGCCGTAGTAATACTGGTTCCACAAAGGTATCTGCAGTTTTTAGAGCAGTTTCTCCATCCGAGAATCGATATAATGCAGCAAAGAGATCCGGTGTCAACAACATGTCGCTCGCTACTGAAGGGACATGGAAATCTTCTAGTGGTCAGCTTTGCATGGTTGGTTGCCTTGGACTTGTCGATGCCAAAGGGAGTAACTGTAATACTCGGATTTGTTTGTATATACCTACCACTTTCTCCATAAAGCAACATAGCATTATTTTGGGAACTTTCTCTCCtattaataacaacaataatgcCTTTTTTCCTCTATCATTTGAACAGCTTGTGCTACCTACAGAACTCTGGAATTATTTCACGTTCACTCATCCGAATTACAGTTACTCAAAAATTAATCCTGCCGGCATTGTCCTTGAAAAAAAAGAGCCCTTCAGTTTTTCAACAGTTGTTAAGAAATCATTTCTTACTTTCCCTAAACTTGAAGATGAGACATTTCAAGATAGTTTGTCCCTTCTTTCAGAAGATCTCACTTTCCATGTCTCGGGTTTTCCTGATCCTATGCCTCGTGTGCAGTCCCCAAGAGTTGATATTCAGATGGAGATTCTCTCTGTTGGTCCCATGTTCGGGCGTTATTGGTACGCTAAGAATGGTTCAACAGAGGAACAACAAGAAGCACCATATCATGCAAATGCTGCTGAATATACAGAAAAACAGCTTCTTTTAAATGTATCTGCACAATTGAGTCTTAGTGGAAAAGGTTATGGTAATTTTTCCGCGCTTTTTCTGGAGGGTCTTTATGATCCACATGTTGGAAAGATGTATCTTATTGGTTGCAGAGACGTGCGAGCATCGTGGAACGTCTTATATGAGAGCTATGATCTTGAGTCTGGAATGGACTGTTTAATTCAGGTGGTTGTTTCTTATCCTCCGACGACAACTCGGTGGTTAGTCAATCCCACTGCCACAATTTCAATAGAAAGTCAAAGGACTGACGATGATACCCTCCGGTTTGATCCAATAAAGCTCCAAACTTTTCCGATTATATACAGAAAGCAGCGTGAGGATGTCCTCTCACACCGAGGCGTTGAAGGGATTCTCCGGATCTTGACACTTACAATGGCAGTTGGTTGCATTTTAAGCCAACTTTTTTACATAAAGAACGATGTGGATTCTCTTCCTTATGTATCTCTCGTTGTGCTAGGTGTTCAATCTCTTGGTTATAGCATTCCTCTAATCACAGGTGCAGAAGCTCTTTTCAAGAGAATGGTTTCCGAATCTTATGATGTGTCGTCATCTGGTACTTTGGAGAACAGTGAGTGGCTCCATATCATTGATTACACCGTGAAACTTTTATTGATTGTATCGTTGCTATTAACCCTGCGACTTTTCCAGAAAGTTTGGAAGTCTCGAATCAGATTGCAAACGCGAACCTCTTCTCAGCCGCTTTCTGTCCCTAGTGATAAAAAGGTACTTCTTTGTACCTTCACTATACATCTTATCGGTTACATAATTGTTATGATAATTCATGGCACGAAAACCAGTCAGAAACATCTCAGTGCAAAGACATATATGGTTGATAAAGAAAATTCTCATTCGTTGCCGGTTTGGGCGACAGAATTGGAAGAATATGCAGGTCTTGTTCAAGACTTTTTCTTGTTTCCTCAAATCATTGGAAACATAATCTGGCAAATCAATTGCAAACCACTAAGGAAACTGTATTTCATCGGAATCACTCTAGTAAGACTTCTTCCTCATATATACGACTACATTCGAGCTCCAGTTCCGAATCCTTACTTTTCCGAGGACTCAGAATTCATCAATCCAAGTCTGGACTTTTACTCAAAATTTGGTGACATTGCTATCCCTGTGACTGCAATTCTTCTCGCAATTTTGGTCTATTTTCAACAAAGATTAGGCTATGACAAGCTGAGTCAGGTTTTGACATTTCGGCAGTATAAACTTCTCCCAAGTTTTAGATATGAAAGGTTGGATTCTAAGTCCTCTGAAACTGAACTAATTTCAGGTATCAATGGTGGTGGTGAAAATGAGAAAGAACATGTTGATGTAGAATGA 3198 0.3902 MKLPFSASAIAFCFLCELLFIVVCNSQVAEEMYRFGRNSHVSYKYDRIDEVQKQCVSVLSASSELRFGYSDVIGMKGELSFVNGDWIQEDGKFPIMPFDDRNGSFSGILSGDRRSSPMKLVSFGVTDVDHTHRLKKSIPINGFMVMGITRDGSFMDSVYGDENLDFRLWPGHSQISIPFQGIYTESKKNGGERVLCLLGNTMLPTRETNPANPWEWMKNPGDVPMSEDDQILLVLRYPLTFTLTNRMITGELRSLNRDSNPKYFDVVHISSQLGSSAKYTFSSQNIVSKACNPYPYKDNMTDNVISVYKGTRFCEILEEVTRDKPLSVVPNWRCNGTDDFCSKLGPFSSDEAIKSTHGGFQDVKLYMQDVICEQEAGRSNTGSTKVSAVFRAVSPSENRYNAAKRSGVNNMSLATEGTWKSSSGQLCMVGCLGLVDAKGSNCNTRICLYIPTTFSIKQHSIILGTFSPINNNNNAFFPLSFEQLVLPTELWNYFTFTHPNYSYSKINPAGIVLEKKEPFSFSTVVKKSFLTFPKLEDETFQDSLSLLSEDLTFHVSGFPDPMPRVQSPRVDIQMEILSVGPMFGRYWYAKNGSTEEQQEAPYHANAAEYTEKQLLLNVSAQLSLSGKGYGNFSALFLEGLYDPHVGKMYLIGCRDVRASWNVLYESYDLESGMDCLIQVVVSYPPTTTRWLVNPTATISIESQRTDDDTLRFDPIKLQTFPIIYRKQREDVLSHRGVEGILRILTLTMAVGCILSQLFYIKNDVDSLPYVSLVVLGVQSLGYSIPLITGAEALFKRMVSESYDVSSSGTLENSEWLHIIDYTVKLLLIVSLLLTLRLFQKVWKSRIRLQTRTSSQPLSVPSDKKVLLCTFTIHLIGYIIVMIIHGTKTSQKHLSAKTYMVDKENSHSLPVWATELEEYAGLVQDFFLFPQIIGNIIWQINCKPLRKLYFIGITLVRLLPHIYDYIRAPVPNPYFSEDSEFINPSLDFYSKFGDIAIPVTAILLAILVYFQQRLGYDKLSQVLTFRQYKLLPSFRYERLDSKSSETELISGINGGGENEKEHVDVE 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00246 1065 MobiDBLite consensus disorder prediction 1046 1065 - -
Tsu06g00246 1065 Pfam Protein of unknown function (DUF2921) 52 1019 IPR021319 -
Tsu06g00246 1065 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 15 1049 IPR021319 -
Tsu06g00246 1065 ProSitePatterns EF-hand calcium-binding domain. 803 815 IPR018247 -
Tsu06g00246 1065 PANTHER PII, URIDYLYLTRANSFERASE (DUF2921) 15 1049 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00246 Tsu-Chr6 2040123 2043836 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00246 - - cam:101499099 1825.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00246 06 2040123 2043836 Tsu06g00246 06 2040123 2043836 ECH