Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00232 ATGGTGAAGGACAAGTTAAAGGAACCTGTTCTTACAGCTTTCACACCTAATGGTGACTATGTGGCCATTCTGTCTGCAAATGCGACGGTCAAAATTTGGAATACAAACAATGGAGATTTGTTAGCCGAGTGGAAGCCATCAGATGGAGATCATGATATTCATTACTCCTGTATTGCTTGCAGTTTCACTGGAAAAAAGCGTAAAAAAGATAAGGGAACTTTCTTATTAGCTCTCGGCACAGATGACGAAAAAGTTCTCGCTATTGATGTTTCCACTGGTGAGAGGAAGTGGCCTACCAGTCATCCAATTCCCGGTGGGATTTGTGGACTTTCATTTGCAAAAAAATGGACAGCTTCTTTAATGTTGTTTGGCATGATGGGAAGGCATATGAGATTAATTCAGAAAACAGGAGAGCTTCTGAAAAGGGGAATCTCAAAAAAGTCCATCTCTTCACTGGCTTTCTCACATGatgaaaaatatttagCTATTTTCAGCTCTAGACTACGAGTTGTAAGCTGGGAAACTGGAAAAGAGGTTCTGAAGTGCCCTAATGATTTGGGAAATATACATCGTGTTTCTATATCCAATGatgcaaaatatataattacatCAGATTCTGAGAGTAAACATCTTCAAGTTTGGAGGTGTGACTTAAGTTTAGGAACTGTGAGTAGTGGTCCAACACTACCCTTTCGGCATGCTCCATTGGTTCTTGATTGCCACCTCGGTTGCAATGGAGAAGATGATTTAGTCGTCTCTGCAGTTATGTCTTCAGGTGGAACTTACATATGGAAGAATTTGAACGCCTCTTCTGAAGATCAAGTACACCGAACTAAAATAACCTTGAAAACAGAAAAAGTTGAAAGTCATAAGGAAAATAGTGAAAGTTCAAGGAAAAGGCACACTTCCATAATTGCATCCAGATTTCAATCCACAGGGGAAGACAAACAGATGAAAGCTTTGGTGACTTATGGCTCTGTAGATCATCCACAATTTACTGTCTTAAATATTAGTGATTTAGGGGAGGATGTGGTATTAAATGTGGGAGATGAGCCCGATTCTATTCAGAAGCATGATAGTCCATCTAAGAAAGCCGTAGAAAAGGAAAGCAAAAAGTCTAAGAAAAGACAAGCAACATCTGATCCTGATCTTCCAACCACAACTGAGAATGTGGATTTCGATCAATGTGAGACTGCAGGAGTCCTTGATGATGATCCAAGCGAGCCAACAATGGGAGAGAAACTTGCTAGTCTCAATTTACTAGATGAAGACAAATCCAAGAGTGAAAAAGAGCAAGAATCTTTGGTTTCATTGAAGCCTCCAAGTGCAGACAGTGTACATATTTTGCTTAAGCAAGCATTAAATGCTGATGACCGTGCCCTTCTGTTGGATTGCTTGTATACTCAAGATGAGAAGGTTATTATGAAGTCAGTTGCGCAGTTGAACCCATCCAATGTCCTCAAACTTCTTAATTCTCTTATTTCCATTATTGAATCTAGGGGTGCAATTTTGTCATGTGCTCTTCCATGGCTGAAGTGTCTACTTCTACAGCATGCAAGTAGAATAATGTCCCAGGAATCTTCTTTAAAAGTTTTGAACTCTTTGTATCAAtTGATTGAGTCTAGAGTCTCCACTTTTAAGTCTGTCTTCCAACTCTCAAGTTTCTTAGACATCCTATACACCGGGGTTCTTGATGAGGAGGTAGATGAAGTTGAAACAGTGCCAATTATCTATGTGGACACAGATGACAGTGAGGCAGAATCCGAGGATGTCATGGAAACTGACAAAGATAGCAAAGACGGAGAACTATCAGATGAAGCATTTAATGATCTTAGTGACATTGAAGGTAGTGATGGTATGATGGAAGATTAA 1872 0.3926 MVKDKLKEPVLTAFTPNGDYVAILSANATVKIWNTNNGDLLAEWKPSDGDHDIHYSCIACSFTGKKRKKDKGTFLLALGTDDEKVLAIDVSTGERKWPTSHPIPGGICGLSFAKKWTASLMLFGMMGRHMRLIQKTGELLKRGISKKSISSLAFSHDEKYLAIFSSRLRVVSWETGKEVLKCPNDLGNIHRVSISNDAKYIITSDSESKHLQVWRCDLSLGTVSSGPTLPFRHAPLVLDCHLGCNGEDDLVVSAVMSSGGTYIWKNLNASSEDQVHRTKITLKTEKVESHKENSESSRKRHTSIIASRFQSTGEDKQMKALVTYGSVDHPQFTVLNISDLGEDVVLNVGDEPDSIQKHDSPSKKAVEKESKKSKKRQATSDPDLPTTTENVDFDQCETAGVLDDDPSEPTMGEKLASLNLLDEDKSKSEKEQESLVSLKPPSADSVHILLKQALNADDRALLLDCLYTQDEKVIMKSVAQLNPSNVLKLLNSLISIIESRGAILSCALPWLKCLLLQHASRIMSQESSLKVLNSLYQLIESRVSTFKSVFQLSSFLDILYTGVLDEEVDEVETVPIIYVDTDDSEAESEDVMETDKDSKDGELSDEAFNDLSDIEGSDGMMED 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00232 623 MobiDBLite consensus disorder prediction 581 623 - -
Tsu06g00232 623 MobiDBLite consensus disorder prediction 607 623 - -
Tsu06g00232 623 MobiDBLite consensus disorder prediction 592 606 - -
Tsu06g00232 623 MobiDBLite consensus disorder prediction 285 311 - -
Tsu06g00232 623 Pfam Dip2/Utp12 Family 458 559 IPR007148 -
Tsu06g00232 623 Gene3D - 11 122 IPR015943 GO:0005515
Tsu06g00232 623 MobiDBLite consensus disorder prediction 352 379 - -
Tsu06g00232 623 ProSiteProfiles Trp-Asp (WD) repeats profile. 13 43 IPR001680 GO:0005515
Tsu06g00232 623 SUPERFAMILY Putative isomerase YbhE 12 219 - -
Tsu06g00232 623 MobiDBLite consensus disorder prediction 285 302 - -
Tsu06g00232 623 PANTHER OS01G0649000 PROTEIN 65 621 - -
Tsu06g00232 623 Gene3D - 125 289 IPR015943 GO:0005515
Tsu06g00232 623 MobiDBLite consensus disorder prediction 350 394 - -
Tsu06g00232 623 MobiDBLite consensus disorder prediction 380 394 - -
Tsu06g00232 623 PANTHER WD REPEAT-CONTAINING 65 621 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00232 K14546 - gmx:100792757 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00232 06 1899591 1906175 Tsu06g00232 06 1899591 1906175 ECH