Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00228 ATGGCGTTTTTCTCTTCAACTGCAACCATTCCACAAAACCTCACCTTCGTTTCCTCTAACAAACTCTCATCCTCTCCTTCTTCTACGACGTCGTTTAACTTCGTTTCATTTCCCTCATTTCAATCCAAGTTCTGCAAAACCATAACTACCTCTCCACAAATCACACGCGCACACGCGCCTCCTGCTCCTTCAACCGAAACCACCACTGCATCTTCCTTCCATGGTCTCTGCTATGTCGTCGGTGACAACATCGACACTGATCAGATCATCCCCGCCGAACATCTCACTCTCGTCCCTTCCAAACCTGACGAGTACCAGAAGCTCGGTTCATTTGCCCTAATCGGACTCCCTGATTCATACACTGTCCGATTTGTTGAATCCGGTGAGACCAAAACGAAATACTCAATCATCATCGGCGGTGCCAATTTCGGCTGTGGATCTTCCCGTGAGCATGCTCCGGTAGCATTAGGTGCTTCCGGTGCTGCTGCTGTTGTGGCGGAATCCTATGCGCGGATCTTTTTCCGGAACTCGGTGGCTACTGGTGAGGTGTATCCGTTGGAATCAGAGACGCGGTTATGTGAGGAGTGTCGTACGGGAGATGTGGTGACGGTTGAGCTTGCGGAGAATCgtttgattaatcatactactgGAAAGGAGTACCAGTTGAAGCCGATTGGAGATGCCGGTCCGGTGATTGAGGCTGGTGGGATCTTTGCTTATGCTAGGAAAACTGGCATGATTCCTACTCGATGA 753 0.49 MAFFSSTATIPQNLTFVSSNKLSSSPSSTTSFNFVSFPSFQSKFCKTITTSPQITRAHAPPAPSTETTTASSFHGLCYVVGDNIDTDQIIPAEHLTLVPSKPDEYQKLGSFALIGLPDSYTVRFVESGETKTKYSIIIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESETRLCEECRTGDVVTVELAENRLINHTTGKEYQLKPIGDAGPVIEAGGIFAYARKTGMIPTR 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00228 250 SUPERFAMILY LeuD/IlvD-like 73 247 - -
Tsu06g00228 250 CDD IPMI_Swivel 79 206 IPR033940 -
Tsu06g00228 250 Pfam Aconitase C-terminal domain 134 181 IPR000573 -
Tsu06g00228 250 PANTHER BNAA05G34440D PROTEIN 20 249 - -
Tsu06g00228 250 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 20 249 - -
Tsu06g00228 250 Gene3D Aconitase, domain 4 70 246 IPR015928 -
Tsu06g00228 250 TIGRFAM LEUD_arch: 3-isopropylmalate dehydratase, small subunit 77 243 IPR011827 GO:0016836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00228 K01704 - gmx:100809737 332.028