Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00203 ATGGCTTTGGCACGTTTGGCTTTGAGGAATTTACAGCAAAGGGTATTATCAACAGGGTCATTGCAAAAGCATTGCAACAGGTTGAGTAATAATAATGAGTTGGATGCAAGATTTTCAACTGCAGTTGGTGATAAGGGAAAATCTGAAGGTAGTGAAGTAGCTGTCTCAGAAGATAAGAAGTCAAGGTTGTTCCCAAGGAGGAGGGGTAAAAAATGGCTTTCTAGAAATTATGATCGTGACTTTCTTCCTGCTCCTTTTGAGCTATTTCCATCAGGTCTTGGTAATGCACTAATGCAAGCAACTGAGAACATcaacaaattatttgaaaaCATGAATTTAACACCATGGTCATTAAGTGGACGTGTGAAAGAAAGTGACAACCATTATAAACTAAAGTATGATATGCCTGGAATCCCTAAAGAGGATGTGAAGATAACAATTGGTGATGGTGTGTTAACAATTAAGGGAGAAcacaaagaagagaaagaagataatgatgatgagTATTGGTCATCTTATGGTTATTATAATACTAGTATGGTTTTGCCTGATGATGCTAAGGTTGATGAAATTAAGGCTGAGTTAAAGGATGGTGTCCTAATTGTTTCCATTCCTAGGAGTGAGAAGCCTATAAAAGATGTTAAGCATGTGAATGTAGAGTGA 663 0.3499 MALARLALRNLQQRVLSTGSLQKHCNRLSNNNELDARFSTAVGDKGKSEGSEVAVSEDKKSRLFPRRRGKKWLSRNYDRDFLPAPFELFPSGLGNALMQATENINKLFENMNLTPWSLSGRVKESDNHYKLKYDMPGIPKEDVKITIGDGVLTIKGEHKEEKEDNDDEYWSSYGYYNTSMVLPDDAKVDEIKAELKDGVLIVSIPRSEKPIKDVKHVNVE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00203 220 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 107 220 IPR002068 -
Tsu06g00203 220 Pfam Hsp20/alpha crystallin family 122 219 IPR002068 -
Tsu06g00203 220 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 5 220 - -
Tsu06g00203 220 SUPERFAMILY HSP20-like chaperones 110 218 IPR008978 -
Tsu06g00203 220 CDD ACD_sHsps-like 122 206 - -
Tsu06g00203 220 Gene3D - 79 220 IPR008978 -
Tsu06g00203 220 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 5 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00203 Tsu-Chr6 1690476 1691900 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00203 K13993 - gmx:100787482 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00203 06 1690476 1691900 Tsu06g00203 06 1690476 1691900 ECH