Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00198 ATGGTTTTCTCTTCCTCATGTTCATTCTTTCTTTGGCTTCTCATTTTATCAGCAACATTTTCTCTAGTTTTAGGGAACAAAGCATTTACAGGAACATATGGAGTAAACTATGGTAGAGTATCTGATAATCTACCACCTCCTGAAAGTGTGGTTACACTTCTCAAAGCTGCAAAGATCAAGAACATAAGAATCTATGATGTAAACCCTCAAGTCCTAAGTGCCTTCAAAGGATCTGGAATAGGAATTATAGTATGTCTTCCTAATGAACTTTTGACAGACATAGGTGTAGCCGAAGATCGCGCGATGAGTTGGATCAAAGATAATGTTCAGCCATATGTTCCAGGCACAAAAATAGTTGGCATTTCTATTGGAAATGAAATATTAGGTAATGGAGATGTTGGAGTTTGGGAAGCTTTGCTTCCGGCGTCGAAAAATATCTATAGTGCCCTTGATAGACTTGGTCTAGCACATTCAATTGAGGTTTCAACACCACATTCAGAGGCTGTTTTTGCCAATTCATATCCTCCATCTTCATGTACATTTAGGGATGATATATTACCTTACATGAAACcacttttacaatttttttcacAGATTGGAACCCCTTTTTATATTAATGCATACCCTTTTTTAGCATATAAAAATGACCCTTCACATATTGACATAAACTAtgctttatttaaaaaaaatcctggCATTTATGATGCTAAGTCAAAACTACATTATGACAATATGTTTGATGCTCAAATTGATGCTGCTTATTTTGCATTAGAAAAAGTTGGATTTGATAAAATGGAAGTGATTGTTGGTGAAACTGGTTGGGCTTCTCATGGTGATGATAATGAAGCTGGAGCAACTGTGAAAAATgcaaaaacttataataaaaatatgagaaaGAGGTTACTTAAGAGAAAAGGAACACCTCATAGGCCTAAAATGTTGGTTAGGGCTTATATATTTGCTTTGTTTAATGAGAATTTGAAGCCTGGTCCAACATCAGAAAGAAACTTTGGATTGTTTAAACATGATGGAAGCATTGCTTATGATATTGGATTTACTGGACTTAGACCTTCTTCAGCAACCTCCTCTTTCCTTTCCTTCAAGGGTATTGGATCTTCATACGTGATGGTTTCTTCAAGCTGCATtgcaattcttcttcttcttatagcATTGTAA 1176 0.3333 MVFSSSCSFFLWLLILSATFSLVLGNKAFTGTYGVNYGRVSDNLPPPESVVTLLKAAKIKNIRIYDVNPQVLSAFKGSGIGIIVCLPNELLTDIGVAEDRAMSWIKDNVQPYVPGTKIVGISIGNEILGNGDVGVWEALLPASKNIYSALDRLGLAHSIEVSTPHSEAVFANSYPPSSCTFRDDILPYMKPLLQFFSQIGTPFYINAYPFLAYKNDPSHIDINYALFKKNPGIYDAKSKLHYDNMFDAQIDAAYFALEKVGFDKMEVIVGETGWASHGDDNEAGATVKNAKTYNKNMRKRLLKRKGTPHRPKMLVRAYIFALFNENLKPGPTSERNFGLFKHDGSIAYDIGFTGLRPSSATSSFLSFKGIGSSYVMVSSSCIAILLLLIAL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00198 391 Gene3D Glycosidases 32 356 - -
Tsu06g00198 391 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 10 381 IPR044965 GO:0004553|GO:0005975
Tsu06g00198 391 SUPERFAMILY (Trans)glycosidases 33 351 IPR017853 -
Tsu06g00198 391 Pfam Glycosyl hydrolases family 17 34 352 IPR000490 GO:0004553|GO:0005975
Tsu06g00198 391 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 10 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00198 Tsu-Chr6 1650856 1652988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00198 28 361 Glycoside Hydrolase AT3G15800 72.836 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00198 - - gmx:113002394 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00198 06 1650856 1652988 Tsu06g00198 06 1650856 1652988 ECH