Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00194 ATGGCTTTGATAACTTCTCAGCCTAAAAATCCCATTTTCTATAATCACTTTACAACCCTTCATTCTTCAATTCCACAATTCAATAGGTCCATTTTGAATCTTGGGCCATTCTCAAAAAATGCAAACAACATTAAAGTTTGTAACTTTAACTCCAAGTCAAGAAATTTTCACTTGATGAAAAACAACCCCTTTAACTATAATCCACAAATTTTAGCTAAATCCAATGCTACAATTGGAGAAGCTACTTTGGAGCAACCAGAGGAGGTAccattgaaaaaatatagaaagattTTGCTATCTGATGTTGAagtgaagagagaaagagaaattcTTTTTGGAAGGAAATGGAATTCATTGGATATTGGAACTTTTGGTATTGTTTTGTCAATGCATTTGTTATGCTTATTTGCTCCATTCAATTTCAATTGGGCAGCCTTTTGGGTTGCTGTGGCACTTTATGTGATTACTGGACTTTTTGGAATCACACTCTCTTTTCACAGGAATCTTTCTCATAGAAGTTTTAAGCTTCCTAAATGGCttgaatatttttgtgcttATTGTGGAGTTCTTGCTCTTCAGGGAAATCCAATTGATTGGGTGAGTACTCATAGGTATCATCACCAGTTTTGTGATTCTGAGAAGGACCCTCATAGCCCTATTGAAGGATTTTGGTTTAGCCATATGACTTGGCTATTTGATACGATTTCTATTGCAGAAAGGTGTGGAGAACCAACCAATGTTGGTGATTTAGAGAAACAATCCTTTTATAGGTTTATCAGAAGCACTTACATGGTGCATCCATTTACTTTGGGAGCTCTTCTATATGCCATTGGTGGATTTCCTTTCCTTGTTTGGGGAGTGGGAGTGAGGGCTGTTTGGGTTTACCATATCACTTGGTTTGTAAACTCAGCTTGCCATGTTTGGGGGAAGCAATCTTGGAACACAAGGGACTTATCTAGAAATAATTGgtGGGTGGCTTTGCTTTCATTTGGTGAGGGTTGGCACAATAACCACCATGCATTTGAGTATTCAGCAAGACATGGTTTAGAGTGGTGGGAAATAGACATGACATGGTACTTAGTGAAATTTCTTCAAACTATTGGTTTGGCAACTGAGGTTAAAGTACCAAGTGAAAGTCAAAAGCAGAAAATGgcatttaataataatgatgtgGTTGCCACATGA 1185 0.3527 MALITSQPKNPIFYNHFTTLHSSIPQFNRSILNLGPFSKNANNIKVCNFNSKSRNFHLMKNNPFNYNPQILAKSNATIGEATLEQPEEVPLKKYRKILLSDVEVKREREILFGRKWNSLDIGTFGIVLSMHLLCLFAPFNFNWAAFWVAVALYVITGLFGITLSFHRNLSHRSFKLPKWLEYFCAYCGVLALQGNPIDWVSTHRYHHQFCDSEKDPHSPIEGFWFSHMTWLFDTISIAERCGEPTNVGDLEKQSFYRFIRSTYMVHPFTLGALLYAIGGFPFLVWGVGVRAVWVYHITWFVNSACHVWGKQSWNTRDLSRNNWWVALLSFGEGWHNNHHAFEYSARHGLEWWEIDMTWYLVKFLQTIGLATEVKVPSESQKQKMAFNNNDVVAT 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00194 394 PRINTS Fatty acid desaturase family 1 signature 166 186 IPR015876 GO:0016717
Tsu06g00194 394 PRINTS Fatty acid desaturase family 1 signature 331 345 IPR015876 GO:0016717
Tsu06g00194 394 PRINTS Fatty acid desaturase family 1 signature 203 232 IPR015876 GO:0016717
Tsu06g00194 394 PRINTS Fatty acid desaturase family 1 signature 288 309 IPR015876 GO:0016717
Tsu06g00194 394 CDD Delta9-FADS-like 142 374 IPR015876 GO:0016717
Tsu06g00194 394 Pfam Fatty acid desaturase 143 361 IPR005804 GO:0006629
Tsu06g00194 394 PANTHER BNAC05G37460D PROTEIN 93 388 - -
Tsu06g00194 394 PANTHER ACYL-COA DESATURASE 93 388 IPR015876 GO:0016717
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00194 1 389 Lipid Metabolism Gene Families AT3G15850 59.848 2.08e-171 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00194 K20416 - gmx:100527024 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00194 06 1618176 1620954 Tsu06g00194 06 1618176 1620954 ECH