Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00185 ATGTTCAGAAAACAtgttattgtttttcttctttttgcaggATCAGCAAAAAGTAGACGAGGAACAATTTTATTCCTTCACGGCGCACCAACGCAATCATTTAGCTACCGAGTTGTTATGTCTCAGTTGTCAGATGCAGGATTCCACTGCTATGCACCAGATTGGATAGGATTTGGTTTCAGCGACAAGCCGCAGCCAGGATATGGTTTTAATTACACAGAAAACGAGTTCCATGATGCATTGGATAAATTGCTCGAGGTGTTGGGGGTTGAATCTCCATTTTTCCTAGTTGTTCAGGGATTCCTTGTAGGTTCATATGGACTAACATGGGCCTTGAAGAATTCAAGCAAGATATCAAAGCTTGCAATACTAAATACTCCATTAACAAGTTCATCTCCTCTTCCTGGACTATTTCAGCAGCTAAAaATTCCTCTATTCGGTGAATTTCAATGCCAGAATGCTATTATTGCTGAGCGGTTTATTGAAGCAGGTAGCCCTTATGTTCTGAAAAATGAAAAGGCTGATGTTTATCGGCTACCTTATTTGGCAAGCAGCGGACCTGGATTTGCTATACTTGCAGCTGCAAGAAAAGCTAACTTTAAAGGTACCTTCGATGAAATAGCAGAAGGATTTGCAACTAACAGATGGGACAAACCAATACTGCTTGCATGGGGATTATCAGACAAGTACTTACCTCAGTCAGTAGCAGAAGAGTTTCAGAATGGAAATCCTCAAAACATCAAGCTTAAATTAATAGAAGGAGCTGGACATATGCCACAAGAGGACTGGCCGGAGAAAGTTATCGATGCTTTAAGAATGTTCTTCTGA 828 0.3949 MFRKHVIVFLLFAGSAKSRRGTILFLHGAPTQSFSYRVVMSQLSDAGFHCYAPDWIGFGFSDKPQPGYGFNYTENEFHDALDKLLEVLGVESPFFLVVQGFLVGSYGLTWALKNSSKISKLAILNTPLTSSSPLPGLFQQLKIPLFGEFQCQNAIIAERFIEAGSPYVLKNEKADVYRLPYLASSGPGFAILAAARKANFKGTFDEIAEGFATNRWDKPILLAWGLSDKYLPQSVAEEFQNGNPQNIKLKLIEGAGHMPQEDWPEKVIDALRMFF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00185 275 PANTHER HYDROLASE ALPHA/BETA FOLD FAMILY 20 275 - -
Tsu06g00185 275 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 20 275 - -
Tsu06g00185 275 Gene3D alpha/beta hydrolase 5 275 IPR029058 -
Tsu06g00185 275 PRINTS Epoxide hydrolase signature 27 45 IPR000639 GO:0003824
Tsu06g00185 275 PRINTS Epoxide hydrolase signature 47 62 IPR000639 GO:0003824
Tsu06g00185 275 PRINTS Epoxide hydrolase signature 252 274 IPR000639 GO:0003824
Tsu06g00185 275 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Tsu06g00185 275 PRINTS Alpha/beta hydrolase fold signature 47 62 IPR000073 -
Tsu06g00185 275 PRINTS Alpha/beta hydrolase fold signature 220 234 IPR000073 -
Tsu06g00185 275 SUPERFAMILY alpha/beta-Hydrolases 20 274 IPR029058 -
Tsu06g00185 275 Pfam Alpha/beta hydrolase family 23 270 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00185 Tsu-Chr6 1554957 1559911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00185 22 133 Acyl Lipid Metabolism Gene Families AT3G05600 30.702 4.18e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00185 - - gmx:100793646 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00185 06 1554957 1559911 Tsu06g00185 06 1554957 1559911 ECH