Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00184 atggcCCCAAAATCAGGAAAAGGGAAAACAAATAAAGCAAAggcagagaagaagaaaaaagaagagaaagcAGTTGCACCTTCTCTTGTTGACATCATTGTGGTAACTCCTTTTGATTCACAAATTGTAATAAagGGTATCTCTACTGATAAGATACTGGATGTGAGGAAACTATTGGCTGTAAAGGTGGAAACATGCCATTTTACAAACTATTCTTTATCTCACGAGGTTAAAGGGAAGAGATTAAATGACAGAGTTGAAGTTGTTACCTTAAAGCCATGTCTTCTAAGAATGGTTGAAGAGGATTATAATGATGAAATTCATGCAATTACACACGTGCGAAGGTTATTGGACATAATTGCCTGCACAACAAGGTTCGGAAAGCCCAAACGTAACTTACCAGGCCCAGATTCAAAGCCCAAGAAAAACGGAAAAgcccaaaatcaaaacaagagcAGTGTGAGTCCACCCGCTACACCGAATGGAGATATTCGGGTCGGGTCACCGTCGTCGGATCCACCGGCGTCGCCGATATCGGATAACGTCGGAATGGTTGCTATTCACCCGACGCCGAAATTGTCAGATTTTTACGAGTTCTTCTCTTTTGCTCATCTCACTCCACCGATTTTACATTTGAAGAAATGTGAAGTGAAGGATGAAGATGATAGACGTAAAGGAGATTACTTTCAACTTCAGGTTAAAATCAGCAATGGGAAAGTGATAGAAGTGGTTGCTTCAGAGAAAGGCTTTTATAGTGTTGGAAAGCTGTCTCTGCAGAGTCACACATTGGTTGATCTTCTGCAACAGCTCAGCAGAGGTTTTGCTAACGCTTATGGATCATTGATGAAAGCTTTTTCGGATCGTAATAAGTTTGGCAATCTTCCATATGGACTCCGATCGAATACATGGCTTGTCGCTCCTTCTGTTGGCGAATCTCTTTCAAACTTTCCAGCTCTACCTGCTGAGGATGAAAACTGGGGTGGTAATGGTGGCGGCCAAGGAAGAAACGGTGAATATGATCATCGACCATGGGCAACAGATTTTGCTATATTGGCTTCTCTTCCTTCAAAAACCGAGGAAGAGAGGGTGATCAGAGATCGAAAAGCTTTTCTGCTTCATAATCAGTTTGTTGATACATCAATATTTAAGGCTGTTGCAGCTATACAACATGTGATAGAGTCCAAGTCTAGTGTGAACTCTTCTCCGGGTTCTGTTCTGCATCAAGATCAAGTTGGAGACTTATCCATTGTAATCAATCGCAACGGAAATGGAAAGGTTGATGCTACACTGAATGAATCCAGTAAACATAATGATGATGTTCAGAAGAACTTAATCAAAGGGTTGTCTGCAGATGAAAGTGTCACTGTTAATGATACTTCTTCATTGTCTTCTGTTGTTGTTCACCACTGTGGATATACAGCAACAGTTAAGGCTGTGGGTAACGTGAACGCGAGGAAGCCTAAAGTTCAAGATATTGAAATAGATGATCAACCAGAAGGAGGCGCAAATGCTCTTAACATCAATAGTTTGAGGGTACTGCTTCACAAATCTGGATCCGATTCATCAGAAGGGACTTTGACGTCCTTGTCAAATTTTGATGACTTGGATGCTTCTACAGATCTTGTTAGGAAGGTGGTTGAAGAATCCATGGAAAAGATAAAGGAAGAGCCAAGTGTTTCAAAACGGTCTATTCGATGGGAACTTGGTTCTTCTTGGATGCAGCATCTGCAAAAACAGGAAAATTCTACTGATGTCGGTTCCAATAACAAGGATGGAAGTGATGTTGAGCAAGCAGTGCAAGGTCTAGGAAAGcaatttaaattattgaagAAGAGGGAAAAGAAACCAAGTGACTTAAACGGTGCAGATTCTGTGGAGCAAAATAACGATGAGCCAAATAATGTTGAATCAAGTAGTTCTAATGGATTAGAGAAACTACTTTCTAAAGAAGCCTTTTTGCGTCTCAAAGAATCCGGATCTGGTCTTCACATGAAGTCAGTGGACGAGCTTATCAACATGGCACACAAGTTTTATGATGAAGTTGCCTTGCCAAAGCTGGTTACAGATTTTGGATCACTTGAACTTTCTCCTGTGGATGGCCGTACGCTGACTGATTTCATGCATTTAAGAGGACTAAAGATGGGATCTTTGGGTGAAGTGGTTAAACTTGCAGAGAATCTTCCACACATACAATCCCTTTGCATTCATGAGATGATTACTCGAGCATTCAAGCATCTACTTAAAGCAGTCATTGCTTCTGTTGACAATGTAGTAGATTTACCTTCAGTCATTGCATCGTCACTGAATTTCTTACTTGGAACGTGTCTAACTGAAGATACGGACCAAACTTCGGGCGATGATCATAATCTCAGAATTGATTGGTTgcatacatttttgtcaaaaagattTGGGTGGACATTAAAAGATGAATTTCAACATTTGAGGAAGCTATCTATTCTAAGAGGGCTTTGTCACAAGGTTGGATTAGAATTGTTCCCTAGAGATTATGACATGGAGTCACCTAAGCCCTTTGGAAAATATGACATTATCAGCCTTGTTCCTGTTTGCAAGCATGTGGGGTGCTCCTCAATAGACGGCCGCAATTTGTTGGAATCATCGAAAATAGCCCTTGATAAAGGAAAGCTTGAGGATGCTGTAAGCTATGGAACTAAGGCATTAGCGAAGATGATGACTGTTTGTGGTCCATATCATCGTAATACTGCCAGTGCATATAGTCTTCTTGCAGTGGTTCTCTACCACACAGGAGATTTTAATCAGGCCACAATTTATCAGCAAAAGGCATTGGATATAAATGAGAGAGAGCTTGGACTTGATCATCCCGACACAATGAAAAGCTATGGGGATCTTTCTGTTTTCTATTATCGTCTGCAACATATTGAGCTGGCTTTGAAGTACGTTAATCGTGCTCTATTCCTCCTTCATTTCACGTGTGGTCTGTCTCACCCAAATACGGCGGCAACATATATAAACGTAGCTATGATGGAAGAAGGCATGGGAAATGTTCATGTTGCGCTTCGGTACCTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTGGGAGCAGATCATATACAGaCTGCGGCAAGCTATCATGCCATAGCCATAGCTCTTTCATTGATGGAAGCATATTCTCTGAGTGTCCAACATGAACAAACTACACTTAAGATACTTCAAGCGAAGCTTGGCGCAGAAGATCTTCGAACACAGGATGCTGCTGCATGGCTAGAATATTTTGAATCAAAAGCAATAGAGCAGCAAGAAGCAGCTAAAAATGGAACTCCAAAGTCAGATACATCCATTGCAAGTAAAGGTCACCTTAGTGTGTCAGATCTCCTTGATTTTATTAGTCCTGACAACGATTCAAAGGGAAATGATGCACAAAGGAAACAGAGGCGTCCAAAGGTGGGCACATGTTTAGTTTTACGTTTACTTgttcttaaaaaacaaaactacttAGATTTTCCCTTTGTGGACTTAGTTGTAAACAAGGATCCAGTTCTGTTTTGA 3528 0.3971 MAPKSGKGKTNKAKAEKKKKEEKAVAPSLVDIIVVTPFDSQIVIKGISTDKILDVRKLLAVKVETCHFTNYSLSHEVKGKRLNDRVEVVTLKPCLLRMVEEDYNDEIHAITHVRRLLDIIACTTRFGKPKRNLPGPDSKPKKNGKAQNQNKSSVSPPATPNGDIRVGSPSSDPPASPISDNVGMVAIHPTPKLSDFYEFFSFAHLTPPILHLKKCEVKDEDDRRKGDYFQLQVKISNGKVIEVVASEKGFYSVGKLSLQSHTLVDLLQQLSRGFANAYGSLMKAFSDRNKFGNLPYGLRSNTWLVAPSVGESLSNFPALPAEDENWGGNGGGQGRNGEYDHRPWATDFAILASLPSKTEEERVIRDRKAFLLHNQFVDTSIFKAVAAIQHVIESKSSVNSSPGSVLHQDQVGDLSIVINRNGNGKVDATLNESSKHNDDVQKNLIKGLSADESVTVNDTSSLSSVVVHHCGYTATVKAVGNVNARKPKVQDIEIDDQPEGGANALNINSLRVLLHKSGSDSSEGTLTSLSNFDDLDASTDLVRKVVEESMEKIKEEPSVSKRSIRWELGSSWMQHLQKQENSTDVGSNNKDGSDVEQAVQGLGKQFKLLKKREKKPSDLNGADSVEQNNDEPNNVESSSSNGLEKLLSKEAFLRLKESGSGLHMKSVDELINMAHKFYDEVALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMGSLGEVVKLAENLPHIQSLCIHEMITRAFKHLLKAVIASVDNVVDLPSVIASSLNFLLGTCLTEDTDQTSGDDHNLRIDWLHTFLSKRFGWTLKDEFQHLRKLSILRGLCHKVGLELFPRDYDMESPKPFGKYDIISLVPVCKHVGCSSIDGRNLLESSKIALDKGKLEDAVSYGTKALAKMMTVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGAEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKSDTSIASKGHLSVSDLLDFISPDNDSKGNDAQRKQRRPKVGTCLVLRLLVLKKQNYLDFPFVDLVVNKDPVLF 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00184 1175 MobiDBLite consensus disorder prediction 142 159 - -
Tsu06g00184 1175 Gene3D Tetratricopeptide repeat domain 982 1104 IPR011990 GO:0005515
Tsu06g00184 1175 MobiDBLite consensus disorder prediction 1 20 - -
Tsu06g00184 1175 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1140 IPR027523 GO:0006996
Tsu06g00184 1175 CDD CLU-central 697 838 IPR033646 -
Tsu06g00184 1175 Gene3D Tetratricopeptide repeat domain 873 981 IPR011990 GO:0005515
Tsu06g00184 1175 SUPERFAMILY TPR-like 945 1063 IPR011990 GO:0005515
Tsu06g00184 1175 ProSiteProfiles TPR repeat profile. 908 941 IPR019734 GO:0005515
Tsu06g00184 1175 ProSiteProfiles Clueless (Clu) domain profile. 322 587 IPR025697 -
Tsu06g00184 1175 SUPERFAMILY TPR-like 874 977 IPR011990 GO:0005515
Tsu06g00184 1175 MobiDBLite consensus disorder prediction 613 641 - -
Tsu06g00184 1175 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Tsu06g00184 1175 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1140 - -
Tsu06g00184 1175 SMART tpr_5 992 1025 IPR019734 GO:0005515
Tsu06g00184 1175 SMART tpr_5 908 941 IPR019734 GO:0005515
Tsu06g00184 1175 SMART tpr_5 950 983 IPR019734 GO:0005515
Tsu06g00184 1175 Pfam Translation initiation factor eIF3 subunit 135 695 837 IPR033646 -
Tsu06g00184 1175 Pfam Tetratricopeptide repeat 907 977 - -
Tsu06g00184 1175 Pfam Tetratricopeptide repeat 991 1065 - -
Tsu06g00184 1175 MobiDBLite consensus disorder prediction 621 641 - -
Tsu06g00184 1175 MobiDBLite consensus disorder prediction 128 178 - -
Tsu06g00184 1175 MobiDBLite consensus disorder prediction 575 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00184 Tsu-Chr6 1538496 1550607 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00184 K03255 - gmx:100801625 1828.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00184 06 1538496 1550607 Tsu06g00184 06 1538496 1550607 ECH