Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00181 ATGTCGAAAGATGATGTTTTCATTGGAGCAATTGATCAAGGAACAAGTAGTAGCAGATTCATAATTTATGACAAATCTACTAAACCAATTGGATCTCATCAAGTTGAGTTCACTCAGTTCTATCCACAAGCAGGGTGGGTAGAGCATGATCCAATGGAGATATTGGAGAGTGTGAAAGTTTGTATTACTAAGGCAATAGACAAGGCAACAGCTGATGGATTCAATGTGGATAAAGGGTTGAAGGCTATTGGTATCACCAATCAAAGAGAGACCACACTTGTTTGGAGCAAATCCACTGGTGCTCCTCTTCACCATGCTCTTGTTTGGATGGATNAGAGCATGATCCAATGGAGATATTGGAGAGTgaGACTTGAAAAGGAGTTATCTGGCGGTAGAACTCACTTTGTAGAGAGTTGTGGTTTGCCTATTAGCACATATTTTAGTGCTTTGAAACTTCTGTGGTTGATGGAGAATGTGGCTGCTGTCAAGGAAGCTATAAAGAAAAAGGATGCATTGTTTGGAACCATAGACACTTGGCTGATATGGAACTTAACCGGCGGGGTAAAAGGAGGATTACATGTTACCGATGTTTCAAATGCATCCCGAACAATGCTGATGAATCTAAAAACCCTAAACTGGGATGAATCTACTTTGAAAGCACTTGCAATCCCTCCTGAAATTTTGCCCAAAATTGTCAGTAATTCAGAGGTTATAGGCAACGTTGCTGCTGGATGGCCAATTCCCGGAATCCCTATCTCTGGATGTTTAGGCGATCAACATGCGGCAATGCTCGGACAAGCGTGCCGTAAAGGTGAAGCAAAAAGTACTTATGGAACAGGTGCTTTCATTCTGTTGAATACCGGAGAAGGAGTAGTTCAATCAAAGCATGGTCTTCTATCAactatagcttataagctaggtCCAAATGCTCCTACCAATTATGCACTTGAAGGATCTGTTGCTATTGCTGGAGCTGCGGTGCAGTGGCTTAGAGACAATCTTGGTCTCATTTCAAATGCTGCAGAGATAGAGGATCTGGCATTACAGGTCGAATCCAACGGCGGTGTTTACTTCGTTCCCGCTTTCAATGGATTGTTTGCTCCGTGGTGGCGTGATGATGCTCGCGGTGTTTTAATTGGAATTACAAGGTATACTAGTAAGGGTCACATTGCTCGAGCCGTGCTTGAGAGCATTTGTTTTCAAGTGAAAGATGTCATAGATTCAATGCACAAAGATTCTGGAGCAGCTGAATCCAAGAAAGATGAGTTTTTGCTTAGGGTTGATGGTGGTGCAACTGTTAACAACCTGTTGATGCAGACTCAGGCGGATTTGTTGGCAACTCCAGTAATTAGACCTGTTGACATAGAAACAACAGCACTTGGAGCAGCCTATGCAGCTGGATTAGCAGCCGGGGTTTGGAAAGAAGATTATGTTTTCGATTCAAAGGATAGGCTGAAAAATGCAAATATTTTCCGTCCTTTAATGGCCGAGGATTCGAGGAAAAAGAAAGCAGAGTCTTGGTCCAAAGCTGTTAATAGATCTTTTGACTTAGCTGATCTTAGTCTTTGA 1569 0.4187 MSKDDVFIGAIDQGTSSSRFIIYDKSTKPIGSHQVEFTQFYPQAGWVEHDPMEILESVKVCITKAIDKATADGFNVDKGLKAIGITNQRETTLVWSKSTGAPLHHALVWMDXSMIQWRYWRVRLEKELSGGRTHFVESCGLPISTYFSALKLLWLMENVAAVKEAIKKKDALFGTIDTWLIWNLTGGVKGGLHVTDVSNASRTMLMNLKTLNWDESTLKALAIPPEILPKIVSNSEVIGNVAAGWPIPGIPISGCLGDQHAAMLGQACRKGEAKSTYGTGAFILLNTGEGVVQSKHGLLSTIAYKLGPNAPTNYALEGSVAIAGAAVQWLRDNLGLISNAAEIEDLALQVESNGGVYFVPAFNGLFAPWWRDDARGVLIGITRYTSKGHIARAVLESICFQVKDVIDSMHKDSGAAESKKDEFLLRVDGGATVNNLLMQTQADLLATPVIRPVDIETTALGAAYAAGLAAGVWKEDYVFDSKDRLKNANIFRPLMAEDSRKKKAESWSKAVNRSFDLADLSL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00181 522 ProSitePatterns FGGY family of carbohydrate kinases signature 2. 376 396 IPR018483 GO:0005975|GO:0016773
Tsu06g00181 522 TIGRFAM glycerol_kin: glycerol kinase 7 515 IPR005999 GO:0004370|GO:0006072
Tsu06g00181 522 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 146 158 IPR018483 GO:0005975|GO:0016773
Tsu06g00181 522 Pfam FGGY family of carbohydrate kinases, N-terminal domain 8 265 IPR018484 GO:0005975|GO:0016773
Tsu06g00181 522 Gene3D - 3 266 - -
Tsu06g00181 522 PANTHER BNAA02G19720D PROTEIN 4 518 - -
Tsu06g00181 522 Gene3D - 267 517 - -
Tsu06g00181 522 PANTHER SUGAR KINASE 4 518 - -
Tsu06g00181 522 SUPERFAMILY Actin-like ATPase domain 268 515 IPR043129 -
Tsu06g00181 522 PIRSF GlpK 5 521 IPR000577 GO:0005975|GO:0016301
Tsu06g00181 522 Pfam FGGY family of carbohydrate kinases, C-terminal domain 273 470 IPR018485 GO:0005975|GO:0016773
Tsu06g00181 522 SUPERFAMILY Actin-like ATPase domain 8 268 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00181 Tsu-Chr6 1508510 1511500 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00181 K00864 - gmx:547750 873.233