Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00172 ATGGATTGGTTCTCATGGCTTTCAAAAACAAACCTTGATCCATCTCTTGTATATGAGTATGGTCTCACACTTGCTCACAATGAGCTAGAACAAGAAGACATGGTTTACTTCAACCATGAATTTCTTCAAAGCATGGGAATCTCCATAGCTAAACATAGGCTAGAAATTCTCAAACttgcaagaaaagaaaaaggaaaaagacaACCACCAAGACCAATTTCAAAGATCATGGTAGCAAtcaaaaagacaaaaaagtGCTTATCTAATTACATAATGAGAAAATTGGTTACATGTGAAGAATCAAATACAGCACTTGTTGTTGTTCCAACATCAAGAGCTAGTAGTAGTAGTTATTATGGAACAAGATCATCATGGAAGAGTAGTAGTTCTTTGGTGAAGAGGAATAAGAAGTTGAAGGTTGCTAAACAAGAGAGGCTATTGCTTACAAATGGAAGTCCTAGTCCTACAATTATGCCTGGTCTTGCTCTTGATAGTTTTTGTAGTACTCCTATGGTTTATCATTTTCATGAGGGAAAGATGAAAGGTGATGATGAAGATGGTAATGGTTATTGGTCAGCTGCTGTTGAAGATATCAGGTGGGATACTATGTTCCAAAATCTAAAGCcaaactaa 633 0.3381 MDWFSWLSKTNLDPSLVYEYGLTLAHNELEQEDMVYFNHEFLQSMGISIAKHRLEILKLARKEKGKRQPPRPISKIMVAIKKTKKCLSNYIMRKLVTCEESNTALVVVPTSRASSSSYYGTRSSWKSSSSLVKRNKKLKVAKQERLLLTNGSPSPTIMPGLALDSFCSTPMVYHFHEGKMKGDDEDGNGYWSAAVEDIRWDTMFQNLKPN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00172 210 CDD SAM_superfamily 2 62 - -
Tsu06g00172 210 Gene3D - 1 68 IPR013761 -
Tsu06g00172 210 PANTHER OSJNBA0033G05.11 PROTEIN 1 210 - -
Tsu06g00172 210 PANTHER OSJNBA0033G05.11 PROTEIN 1 210 - -
Tsu06g00172 210 SUPERFAMILY SAM/Pointed domain 5 67 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00172 Tsu-Chr6 1416835 1418135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00172 - - pvu:PHAVU_010G157800g 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00172 06 1416835 1418135 Tsu06g00172 06 1416835 1418135 ECH