Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00168 ATGTCATATAATTCTAAATCAACCTTTGATGAGCTTAAATGGGTGATTCATATAAGAAAAACACTtgaagaagaatttgaagaGGAAGATGGTGAATTATCTGTAACCATTTTCAATGTTCCAAAGCTTCTTATGGTTAGTGATCCGGATTCTTATGTTCCACAACAAGTTGCAATTGGTCCATACCATTATTGGCGACCAGAACTCTATGAGATGCAAAGTTACAAGCTTGCAGCAACAAAAAGATTCCTTAAATCACTACAAACTATCAAACTAGACAACCTTGTTGACCAATTGACCAAGTTGGAACAAAGGGTTAGATCATGTTACCATAAATACTTAGATTTGAACGGCGAAACGATGGTATGGATGATGATTGTTGATGCATCATTCTTACTTGAGTTACTTCAAATTTATGCAATTCAAGAAGGTGCAAcaaagagagtagtttcatcaAGCATGTCACATTTAGTTGACTATGCTTGTAGAAAATCAGCTCATAATGCAATGTTGAGAGACCTTGTTATGTTAGAGAATCAAATTCCATTATGTGTTTTGAGAAAAATGATCAAGTTCAAATTCTCGACAAAAGAAGCTGCTGATGAAATGTTGATTTTCATGTTCATAGgtttgtttaaacaaatttcaccttttaagaTGATTGAAGATATTCCAAACATTAAAGTCTCAGAAAGTGCACATTTGTTAGATTTCTTTTATGACATGATTGTGCCTAAATTAGTAACAGAAAATGATGTTACTATTGATGTTGAGATTCAACAAGAAGAGGAACAAGATCACAAAGGAGACGATGAAAATTCAAAAGATGAGTCTAGTTATATTAAGCAATCATTCAATGAACTTTGGAAGATTCTTTCAAAACTTAACAAAGGACCTATGAAATTACTAAAAAGGGCACTTGTGTCAAGACCTTTGAAATTGCTTGTAAAGTTTCCTTGGAAAATCATTACCAATCTTCCTGGAGGTAAACTTCTAAAACAACCTCTTGAATCTATTTTTTCCCCTAAAGAAAAAAGTGATGAAGaaaatcaagaaaatgaaaCTTCTAGTACTCTTATTAATAAGCCACCTTTGATTGAAGAAATCACTATTCCTAGTGTTAAAGAGCTCATGAATTCAGGTGTGAATTTTTTTCCTACTACTAATGGAAGCATATCAAGTATTAGTTTTGATCCTAAAACAAGAACATTTTACCTACCTATAATTAGTTTGGATGTTAATACCGAAGTTTTTCTACGAAACTTGGTTGCATATGAATCATCGATTGGATCAGGACCGTTGGTTATAACTCGATACACCGAATTGATGAATGGAATTATAGACTCGGAGGATGATGCAAAGATTTTAAGAGAAAAAGGGATTATTTTAAATCATTTAAAGAGTGATAAAGAAGTTGCTAACATGTGGAATGGAATGAGCAAGTCATTGAGATTGTCAAGggtattatttttggataatGCTATTGAAGATATTAACAAGTTTTACAATAGTAGAATGAAGGTGAAAATTTGGAAATTTATGAAGTCTTATGTGTTTGGTTCATGGAAATTCTTAACATTTTTAGCTGCTATTTTCTTGTTGCTTTTGATGGCTGTCCAAGCTTTTTGCTCAGTCTACTCATGTAGTCGCTTTTTTGATAAGGCACTACAACAAAGTGATTAA 1683 0.3096 MSYNSKSTFDELKWVIHIRKTLEEEFEEEDGELSVTIFNVPKLLMVSDPDSYVPQQVAIGPYHYWRPELYEMQSYKLAATKRFLKSLQTIKLDNLVDQLTKLEQRVRSCYHKYLDLNGETMVWMMIVDASFLLELLQIYAIQEGATKRVVSSSMSHLVDYACRKSAHNAMLRDLVMLENQIPLCVLRKMIKFKFSTKEAADEMLIFMFIGLFKQISPFKMIEDIPNIKVSESAHLLDFFYDMIVPKLVTENDVTIDVEIQQEEEQDHKGDDENSKDESSYIKQSFNELWKILSKLNKGPMKLLKRALVSRPLKLLVKFPWKIITNLPGGKLLKQPLESIFSPKEKSDEENQENETSSTLINKPPLIEEITIPSVKELMNSGVNFFPTTNGSISSISFDPKTRTFYLPIISLDVNTEVFLRNLVAYESSIGSGPLVITRYTELMNGIIDSEDDAKILREKGIILNHLKSDKEVANMWNGMSKSLRLSRVLFLDNAIEDINKFYNSRMKVKIWKFMKSYVFGSWKFLTFLAAIFLLLLMAVQAFCSVYSCSRFFDKALQQSD 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00168 560 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 4 549 IPR004158 -
Tsu06g00168 560 Coils Coil 85 112 - -
Tsu06g00168 560 Pfam Plant protein of unknown function 37 536 IPR004158 -
Tsu06g00168 560 PANTHER UPF0481 PLANT-LIKE PROTEIN 4 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00168 Tsu-Chr6 1345975 1347657 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00168 - - gmx:100806933 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00168 06 1345975 1347657 Tsu06g00168 06 1345975 1347657 ECH