Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00164 ATGGCGCTTCTCCTCCGCCTCAAAACAACCAGACCCAAATCCCACTCTCTCACCAACTCTCCTTCGCTCCACCACCTCTTCTCCACTACCGGCGGCGACGGTGGCGACGATGGTAACAAACCACCAAGCTTCGCGGACTCTTTACGAGATCTCAAAAGCTCACTCAAACGACAACCAACCTCCAATTCTTCACACAGTAATGTTTCCAATATCATGAGCAAAATCCAGGCTTTCCGTAACAGAACCGCCGAACCAGTTTCTTCAGGTCCATCCCCGCAGCAACAAATCTCATTTCAGGAGATTTACACCAACATGCAGAACCGATCCGGTGTAAAAACTGGTTCGGAAGGATCAAATGGTACCATCACCACCACTGGCGGCGGCGGCACTGGAGGAGGTACTTCGTTGGGTTTCGATGCGATTCGAGGAAGTTTAAGGAAACTATCAGAGTCGAATCAAGTGCCAACATCGAAATGGAGGCCGAGTTCGCTGGTGATCAATGGGACGAGTAATTTGCCGGATAAAATATTCGGAAAGGAGATAAGGGAAGCAGCGAATTCCAATAATTTGGGTTATGTTAAGTCATATATGCCCGATGAATTGGGtgagaaattgaagaaattgagaCCTCAAGTGAAAGGAAATGATTGGTTTTCAATTGCTGAATTGAGTGAGAGGTTGAAGAAAGTTAGGGAAATGGATGAAATTGAAGCTAGTTCCAATACCAATGACCAAAATGGTCAACTATTCTCGCATTTGAGAAGTGCAATTGGACATATTAAATCTAAAGAATCCGAGTCGCCAAAGAATGTTTCACTGCAGAGAGTTAATTTTTTGTCAATAATGAATGGGACTCCAAGTTACTTGACAAAGCCTCCTAAAGAGCATCTTGTTGAAAAGTATTTTCATCCAGATAACATGTCCTCTGTCGAAAAGTTGAAAATCGAGCTCACAAAGGTTAGAGATGAATTTAAGATGTCCGAGTCAGATTGTGGCTCTGCTCGTGTTCAAGTTGCGACACTCACTACCAAGATTAAACATCTATCATCAGTTCTACATAAGAAGGATGTGCATTCTCGGAAAGGTCTGATAGCAATGGTTCAAAAGCGGAAAAAGTTACTGAAATACCTTAGAAGAACCGACTGGGATTCCTATTGTTTTGTTATCTCTAAGCTAGGTCTACGTGATAATCCAGAATATACTTATAAAGCCCGGACTGGTAAATCAGGCGACGTTGCCAATTAA 1245 0.4265 MALLLRLKTTRPKSHSLTNSPSLHHLFSTTGGDGGDDGNKPPSFADSLRDLKSSLKRQPTSNSSHSNVSNIMSKIQAFRNRTAEPVSSGPSPQQQISFQEIYTNMQNRSGVKTGSEGSNGTITTTGGGGTGGGTSLGFDAIRGSLRKLSESNQVPTSKWRPSSLVINGTSNLPDKIFGKEIREAANSNNLGYVKSYMPDELGEKLKKLRPQVKGNDWFSIAELSERLKKVREMDEIEASSNTNDQNGQLFSHLRSAIGHIKSKESESPKNVSLQRVNFLSIMNGTPSYLTKPPKEHLVEKYFHPDNMSSVEKLKIELTKVRDEFKMSESDCGSARVQVATLTTKIKHLSSVLHKKDVHSRKGLIAMVQKRKKLLKYLRRTDWDSYCFVISKLGLRDNPEYTYKARTGKSGDVAN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00164 414 Gene3D - 362 397 - -
Tsu06g00164 414 SUPERFAMILY S15/NS1 RNA-binding domain 317 396 IPR009068 -
Tsu06g00164 414 Hamap 30S ribosomal protein S15 [rpsO]. 307 396 IPR005290 GO:0003735|GO:0005840|GO:0006412
Tsu06g00164 414 CDD Ribosomal_S15p_S13e 316 393 IPR000589 GO:0003735|GO:0005840|GO:0006412
Tsu06g00164 414 MobiDBLite consensus disorder prediction 1 43 - -
Tsu06g00164 414 MobiDBLite consensus disorder prediction 11 27 - -
Tsu06g00164 414 Coils Coil 310 330 - -
Tsu06g00164 414 MobiDBLite consensus disorder prediction 110 138 - -
Tsu06g00164 414 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 412 - -
Tsu06g00164 414 Gene3D - 313 360 - -
Tsu06g00164 414 SMART Ribosomal_S15_2 317 395 IPR000589 GO:0003735|GO:0005840|GO:0006412
Tsu06g00164 414 MobiDBLite consensus disorder prediction 110 131 - -
Tsu06g00164 414 Pfam Ribosomal protein S15 319 395 IPR000589 GO:0003735|GO:0005840|GO:0006412
Tsu06g00164 414 TIGRFAM S15_bact: ribosomal protein uS15 318 395 IPR005290 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00164 - - cam:101488736 491.5