Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00148 ATGCGACGCGGTGCATCTAAGAAAACGGGTCAATCCAATTCCAATCCCTCCGCCGCGGATCTCTTCCGTTCCGCTTCAAGTAAAGCAAACTCAAAGGAACTGGAGCGAATCGATAGTCTATTTTATACGTATGCCAATGGATCTTCCGGGTTGATTGATCCAGAAGGAATTGAAGCACTTTGTGCTGATATAGAGGTGGATCATACTGATTTGAGGATTTTGATGCTTGCGTGGAAAATGAAAGCTGAGGAGCAAGGTTATTTTACCTTGGATGAGTGGAGAAGAGGCTTAAAAGCACTAAGGGCCGATACAGTCAGTAAATTGAAGAAGGCACTTCCAGATCTAGAAAAGGAGGTCAGGAGACCGTCAAATTTTTCAGATTTCTATTCTTATGCTTTCCAATATTGTCTAACAGAGGAGAAGCAGAAAAGCATTGATATAGAGAGCATTTGTGAATTACTTACTCTTGTTTTGGGCTCAACATTTCCAACCCAAGTCAACTTATTTGTGGAATATTTGAAGGTGAATAATTGGTATATCACATTATTGCTTTAG 555 0.4054 MRRGASKKTGQSNSNPSAADLFRSASSKANSKELERIDSLFYTYANGSSGLIDPEGIEALCADIEVDHTDLRILMLAWKMKAEEQGYFTLDEWRRGLKALRADTVSKLKKALPDLEKEVRRPSNFSDFYSYAFQYCLTEEKQKSIDIESICELLTLVLGSTFPTQVNLFVEYLKVNNWYITLLL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00148 184 Gene3D Cullin, PONY binding domain 122 181 IPR042460 -
Tsu06g00148 184 MobiDBLite consensus disorder prediction 7 25 - -
Tsu06g00148 184 ProSiteProfiles DCUN1 domain profile. 32 184 IPR005176 -
Tsu06g00148 184 PANTHER RP42 RELATED 2 180 IPR014764 -
Tsu06g00148 184 MobiDBLite consensus disorder prediction 1 25 - -
Tsu06g00148 184 Gene3D - 30 120 - -
Tsu06g00148 184 SUPERFAMILY EF-hand 32 100 IPR011992 -
Tsu06g00148 184 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 2 180 - -
Tsu06g00148 184 Pfam Cullin binding 107 176 IPR005176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00148 Tsu-Chr6 1141067 1145927 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00148 K17824 - gmx:100499856 324.324