Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00147 ATGTTGCTTTGTGGAAAGGGTTCAAGAAACGGCGTCGTTTTGGGATCTGTGCCGGTGTACCTTAACGTGTACGATCTGACACAATTTAACGGTTACGCTTACTGGTTTGGTCTTGGAGTTTATCATTCCGGCGTTCAAGTTCATGATGTTGAATATGCTTTTGGGGCACATGAGCATGCATCAACTGGAATATTTGAAGGAGAACCAAAGAAATGTGAAGGATTCAGATATAGGAAAACAATATTAATTGGAAAAACAGATAAGGATATTGATGAAGTGAGAGATTTGATGATTCAACTTGCTGCTGAGTACAAAGGAAATGCTTATAATCTCATTACAAAAAATTGTAACCATTTTTGCAATGATGCTTGTGTTAGGCTCACTGGAAATTCTATACCTAGTTGGGTTAATCGTCTTGCTAGAATTGGTTTTATGTGCAATTGTGTTTTACCCGTGACATTGAATTCAACCAAAGTTAGACATCATCATAGAATAGAAGACAAACAATGTGAAGATAGGACACAACCCAAACAAACATTAACAAGTGAACAACCAAACAAGGTTCCTGTTTCAAATTCAACAACATCTTCACCGGCTTCTACTAGCTCCGGTTTAAGAAGGGGAAGGAGTAGAACTAGACGTCGTCTTCCTCCCCCTTCACCTTTGATTAATTGTTCCTCATCATCTTGA 690 0.3841 MLLCGKGSRNGVVLGSVPVYLNVYDLTQFNGYAYWFGLGVYHSGVQVHDVEYAFGAHEHASTGIFEGEPKKCEGFRYRKTILIGKTDKDIDEVRDLMIQLAAEYKGNAYNLITKNCNHFCNDACVRLTGNSIPSWVNRLARIGFMCNCVLPVTLNSTKVRHHHRIEDKQCEDRTQPKQTLTSEQPNKVPVSNSTTSSPASTSSGLRRGRSRTRRRLPPPSPLINCSSSS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00147 229 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Tsu06g00147 229 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Tsu06g00147 229 Gene3D PPPDE domains 15 172 IPR042266 -
Tsu06g00147 229 MobiDBLite consensus disorder prediction 165 229 - -
Tsu06g00147 229 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Tsu06g00147 229 PANTHER F23A5.4 PROTEIN 14 229 - -
Tsu06g00147 229 PANTHER DESUMOYLATING ISOPEPTIDASE 14 229 IPR008580 GO:0008233
Tsu06g00147 229 MobiDBLite consensus disorder prediction 175 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00147 Tsu-Chr6 1135600 1138965 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00147 K22763 - gmx:100796813 314.694