Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00107 ATGAGTTCTAGAATCCCATCTCATCAGCTTAGCAATGGCCTATATGTATCAGGGAGGCCAGAGCAGCCGAAAGAAAGGCTTCCAACCATGACCTCAGCAGCCATGCCATATACCGGCGGAGACATAAAAAAGTCGGGAGAATTGGGGAAAATGTTTGATATTCCTGTTGATGGCTCAAAATCTAGAAAATCTGGACCAATAACAGGTGCACCATCGCGGACAACATCTTTCGGAGGAGCTGGATCACATTCTGGACCTATTCATCCTAATGCTGCTGCGCGAGCTATCTATACTACTGGTGGTGGTTCAACTTCACAAAAGAAATCAAATTCCGGGCCGCTGAGTAAGCATGGAGAACCAGTTAAAAGGTCTTCTGGTCCTCAATCTGGTGGAGTAACTCCAACTGGGCGTCAACATTCTGGACCGCTTCCTCCTATTCTTCCAACAACAGGTCTCATTACGTCGGGACCGATATCGTCTGGCCCGCTAAACTCTTCTGGTGCTCCTAGGAAAGTGTCTGGTCCTTTGGAAGCGACAGGTTCGATGAAGCTGCAAGGTTCAGCTGCTGCCGTTCACAATCAAGCTGTAACCGTTCTTAGTCAAGTTGCTGCGTCTTTCACTTGGAATACTTATTGGGGAAGAAGAGCTATTATGGGATTCGTTGCTAATTATCCGGACTCTGAGCTAAGAACTGCAAAGAATGGACAATTTGTGAAAGTCTCTGGGGTTGTCACTTGTGGTAATGTGCCTCTCGAGTCATCTTTCCAGAAAGTTCCCAGATGTGTATATACATCAACAAGTTTATATGAGTATCGAGGATGGGACTCAAAAGCTGCCAATCCTACACATCGTCGATTTTCTTGGGGCCTTAGATTGCTGGAAAGGCGTGTGGTTGACTTTTACATCTCAGATTTCCAATCTGGTCTAAGGGCACTGGTTAAGACTGGTCATGGAGCAAGAGTGACCCCATATGTTGATGACTCGGTTCTCATCAATGTAAATCCAACCAAAGAAGAGTTATCTCCAGAGTTCCTCCGATGGTTGGGAGAGAGAAACTTGTCAAGTGACGACCGCATCATGCGGCTGCAAGAAGGGCATATTAAAGAAGGAAGCACCGTGAGTGTAATGGGAGTTGTTCAGCGGAATGAGAACGTGCTTATGATTGTTCCTCCACCGGAGCCAATCACAACAGGTTGCCACTGGCTGAAATGTATTTTTCCTGCTAGCTTGGAAGGTATAGTCTTAAGATGTGAAGACATGTCGAAGAATGATGTGATACCAGTTTAA 1287 0.46 MSSRIPSHQLSNGLYVSGRPEQPKERLPTMTSAAMPYTGGDIKKSGELGKMFDIPVDGSKSRKSGPITGAPSRTTSFGGAGSHSGPIHPNAAARAIYTTGGGSTSQKKSNSGPLSKHGEPVKRSSGPQSGGVTPTGRQHSGPLPPILPTTGLITSGPISSGPLNSSGAPRKVSGPLEATGSMKLQGSAAAVHNQAVTVLSQVAASFTWNTYWGRRAIMGFVANYPDSELRTAKNGQFVKVSGVVTCGNVPLESSFQKVPRCVYTSTSLYEYRGWDSKAANPTHRRFSWGLRLLERRVVDFYISDFQSGLRALVKTGHGARVTPYVDDSVLINVNPTKEELSPEFLRWLGERNLSSDDRIMRLQEGHIKEGSTVSVMGVVQRNENVLMIVPPPEPITTGCHWLKCIFPASLEGIVLRCEDMSKNDVIPV 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00107 428 MobiDBLite consensus disorder prediction 152 167 - -
Tsu06g00107 428 PANTHER OSJNBA0035M09.9 PROTEIN 1 199 IPR040339 -
Tsu06g00107 428 PANTHER OSJNBA0035M09.9 PROTEIN 196 428 IPR040339 -
Tsu06g00107 428 MobiDBLite consensus disorder prediction 1 16 - -
Tsu06g00107 428 MobiDBLite consensus disorder prediction 65 81 - -
Tsu06g00107 428 PANTHER UBIQUITIN-SPECIFIC PROTEASE FAMILY C19-RELATED PROTEIN 1 199 - -
Tsu06g00107 428 PANTHER UBIQUITIN-SPECIFIC PROTEASE FAMILY C19-RELATED PROTEIN 196 428 - -
Tsu06g00107 428 MobiDBLite consensus disorder prediction 1 178 - -
Tsu06g00107 428 MobiDBLite consensus disorder prediction 97 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00107 Tsu-Chr6 838436 842965 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00107 - - pvu:PHAVU_008G253800g 801.971