Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00087 ATGGCTGCTGCTACTAGTGTTGGTGTTGTTGGTGGTAATGGATCTGCTGTTTCTTGGATGCAATTtagaagaaatgaaaagaaacaaaataagatgaataaattTAGGGTTTCTTGCTCTAATTCTTCTTCTGTTATGGATCCTTATAAGACATTGAAAGTTGAACCAGGTGCTTCTGAATCTGATGTTAGGAAGGCTTTTAGAAAGCTTGCTTTGCAGTATCATCCTGATGTGTGCAGAGGAAGAGATTGTGGTGTGCCGTTTCACCTAATCAATGAGGCTTATGATGCTTTGCTTGCAAatttgagagaagaagaaacaaatgcACAAGAAACCTGTGAGACCTATACCTATGAAGAACCAGATTATGATTATTGGGAAGAGTGGTCTGGTTGGGAAGGAGCAGGAGGAATCCGTGATTACTCTAATCCTTATGAAGACAGTGTAAATTAA 453 0.3532 MAAATSVGVVGGNGSAVSWMQFRRNEKKQNKMNKFRVSCSNSSSVMDPYKTLKVEPGASESDVRKAFRKLALQYHPDVCRGRDCGVPFHLINEAYDALLANLREEETNAQETCETYTYEEPDYDYWEEWSGWEGAGGIRDYSNPYEDSVN 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00087 150 CDD DnaJ 47 98 IPR001623 -
Tsu06g00087 150 PRINTS DnaJ domain signature 49 67 IPR001623 -
Tsu06g00087 150 PRINTS DnaJ domain signature 67 82 IPR001623 -
Tsu06g00087 150 PRINTS DnaJ domain signature 83 103 IPR001623 -
Tsu06g00087 150 Coils Coil 92 119 - -
Tsu06g00087 150 Gene3D DnaJ domain 19 110 IPR036869 -
Tsu06g00087 150 SMART dnaj_3 46 103 IPR001623 -
Tsu06g00087 150 PANTHER HEAT SHOCK PROTEIN BINDING PROTEIN 4 142 - -
Tsu06g00087 150 SUPERFAMILY Chaperone J-domain 43 135 IPR036869 -
Tsu06g00087 150 Pfam DnaJ domain 47 99 IPR001623 -
Tsu06g00087 150 ProSiteProfiles dnaJ domain profile. 47 127 IPR001623 -
Tsu06g00087 150 PANTHER CO-CHAPERONE PROTEIN DJLA 4 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00087 Tsu-Chr6 683524 685428 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00087 - - mtr:MTR_4g007300 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00087 06 683524 685428 Tsu06g00087 06 683524 685428 ECH