Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00069 ATGGCACTCTCAACAGCTATGGCTATTTCATCTCTACCTCACAACAACTTTCTTCCTCAATTCCTTTCTTCCACTTCTTCACTATCTTCTTCTTCCCTTTCTACTACTAAACCTCTTCGAAACacttcattcaaaatcaaaagcCTTAGAACTGAAAGAGAACCTTCATCATCAGATCCAAATCCACGTTTTGATCCAAAATCCGGTGTAGCGGTTTACAAACCCAAATCCTATGAAGTTCTCGTCACTGATGCTGCTAATTCTCTCGCTTATGCTCTTCAAGACGGAAAATCTCGACTCGAGATCGATTTCCCACCCTTGCCCAGCGACATTTCTTCATATAAGGGATCTTCAGATGAGTTCATCGATGCCAACATTCAACTTGTCTTGACTGTTGTAAGAAAGCTCCAGGAGAAAATAGAGACCAGAGCTTGCATAGTATTCCCTGATAAGCCAGAAAAGCTTCGAGCCTCTAAGTTGTTCAAAGCAGCTCTAGATTCAGTTAATGGCATCAGTATAGGTTCCTTAGATGATGTCCCTGCAGGCCCAGTGGCTTCATTTTTCCGATCTGTTAGGAACACCCTTGATTTTGACTTTGAAGATGAGAATGAAGATCGTTGGAAGTCTAATGAGTCTCCATCACTCTACATATTCATTAATTGCAGTACACGTGAACTTGGTTATATTGAGAAGTATGTGTTATTTAATATTAACACACCAGACCTTGCAAAGAAGGCCATATTTCCAGTTTATATAACAACATTAGGTCCCTGGCAGGTGATGCTTAAACAGGCCGATGGTTCTTTTGCTTGTGTAGCAGAAAGTGCAACCCGTTTCACCCTTGGTGAAGCAAAAGAAGAACTGTTGAGGGTCCTGGGACTTCAAGAAGAAGTGGGAAGCTCTCTAGAATTTCTACGAAGAGGCTATAAGTCAAGCACGTGGTGGGAAGAAGACTCTGATTTGGAACTATCTAATGCATGGCGGACTTGA 990 0.4111 MALSTAMAISSLPHNNFLPQFLSSTSSLSSSSLSTTKPLRNTSFKIKSLRTEREPSSSDPNPRFDPKSGVAVYKPKSYEVLVTDAANSLAYALQDGKSRLEIDFPPLPSDISSYKGSSDEFIDANIQLVLTVVRKLQEKIETRACIVFPDKPEKLRASKLFKAALDSVNGISIGSLDDVPAGPVASFFRSVRNTLDFDFEDENEDRWKSNESPSLYIFINCSTRELGYIEKYVLFNINTPDLAKKAIFPVYITTLGPWQVMLKQADGSFACVAESATRFTLGEAKEELLRVLGLQEEVGSSLEFLRRGYKSSTWWEEDSDLELSNAWRT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00069 329 MobiDBLite consensus disorder prediction 44 68 - -
Tsu06g00069 329 Pfam Domain of unknown function (DUF1995) 75 233 IPR018962 -
Tsu06g00069 329 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 255 329 - -
Tsu06g00069 329 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 25 234 - -
Tsu06g00069 329 MobiDBLite consensus disorder prediction 46 60 - -
Tsu06g00069 329 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 255 329 IPR044687 -
Tsu06g00069 329 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 25 234 IPR044687 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00069 Tsu-Chr6 537816 544175 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00069 - - aip:107617195 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00069 06 537816 544175 Tsu06g00069 06 537816 544175 ECH