Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00038 ATGGACTACAGCTCTGAAGAAGAGTCAGATATCAGTGAATCTGAGATTGAGGAGTACTCGGAGAAACCGTACAAGCAATTAAAAGACGGTAATTACAAGGTGAAGAATTTTAATGGCACACTTCGGTGCCCATATTGTGCTGGAAAGAAGAAGCAGGAATTCAAATATAAGGATTTGCTGCAACATGCATCCGGAGTAGGTAAAGGTTCAGCAAACAGAAGTGCGAAACAAAAGGCCAACCACCTTGCTCTGGCAAAGTATTTGGAGACCGACTTAATCAATGAAGCAGATCAAATACCTCAACCAGCTGTGATCCAACCTGTCAACCAACCTGCCCAGCAAGTTGAGAATTATGTCTGGCCATGGACCGGCATTATTGTTAACATCAAGAGCAAATTACAGGATTCTGCATACTGGCTAAAGGAATTTTCCAAGTACAAACCTTTGAATTTTCATATATTCTTGGTGGATGGTGATGCTCAGGCCGTAATTGACTTCAATAATGACTGGAATGGTTTCATGAATGCAAGTGAGTTTGAGAAATCCTTTGAAACTAAACGTCATGGAAAAAAGGATTGGAATTCAATGGACTCGCAGGCCAGTTCAGACATTTATGGATGGTGTGCACGTGAAGACGATTATAATTGTGGAGGGCCAATCGGGGAGTACCTTCGCAACAAAGGAAGGCTCAGGACAATTTCAGATATTGTTCAAGAAGCATCTGAAAGCAGAAATAGCATTGTTGAAAACCTTGCAAATGAAATTGATATTACAAATGAAAACCTCAACAAAATGCAGTACAAGTATAATGAGAAGACTATGTCCTTAAGTAGGATGCTGGAGGAGAAAGACAAGCTACACAATGCTTTTGTGGAAGaGTCAAGGAGTATGCAGCGTAAAGCCCGTGAGGAGGTACGCAGGATCTTGGAAGAACAGGAAAAGATGAGTAATGAATTGGATGAAAAAATGCGGAAGCTTGATACCTGGAGTAGAGATCTGAATAAACGTGAGGTACTAACTGATCAAGAGAGGCAGAAACTTGACGAGGACAAGAAGAAGAAAGACCTGAGGAATGAATCGCTCCAGTTGGCTTCAAAGGAGCAGAAAATAGCCGATGCAAATGTCTTCAAGCTTGTCGAACAGCAAAAGagagaaaaagaagaggcCTTAAACAAGATCCTTCAATTGGAGAAGCAGCTTGACGCCAAACAAAAGTTAGAGATGGAAATTGAGGAGTTAAGAGGGAAATTGCAAGTTATGAAACATCTTGGTGATCAAGATGATGCAGctattaagaaaaaaatggaagaaatgaCTGCTGAATTGACTGACAAAATAGAAAGTTTGGAGGATATGGAGTCAATGAATCAAACCCTCATTGTCAAGGAGCGGCAAAGCAATGATGAACTGCAGGAAGCTCGTAAAGAATTAATAGAAGGGTTGAATGCAATGATGACCCGTCCTAAAGCTACTAATATTGGGACCAAGAGAATGGGAGAACTTGACGAGCAGGTGTTTTTGAATGCCTGCAAGAAAAGATATTTTGAAGAAGGTGGGGTAAAGGGCATGGAGCTTTGCTCTTTTTGGCAGGAGAATGTGAAGAATTCAAATTGGCATCCTTTTAAAGTGATCAGAGAGAATGATACACATGTGTCAGTTATAGATGAGGATGACGAGAAGTTAAAAAAACTCAAGCAGGAATGGGGAGATGAGGTATACTCAGCAGTTGTAACAGCCGTGAAAGAAGTAAATGAATACAATCCAAGTGGAGGATATGCTGTTTGGGAGCTATGGAACTTCAAGGAAAAGAGGAAGGCTACTTTGAAAGAAGTTATAACATATATTGTGGAACAGATGAAACAACTTAAGCGCAAGAGATGA 1881 0.3982 MDYSSEEESDISESEIEEYSEKPYKQLKDGNYKVKNFNGTLRCPYCAGKKKQEFKYKDLLQHASGVGKGSANRSAKQKANHLALAKYLETDLINEADQIPQPAVIQPVNQPAQQVENYVWPWTGIIVNIKSKLQDSAYWLKEFSKYKPLNFHIFLVDGDAQAVIDFNNDWNGFMNASEFEKSFETKRHGKKDWNSMDSQASSDIYGWCAREDDYNCGGPIGEYLRNKGRLRTISDIVQEASESRNSIVENLANEIDITNENLNKMQYKYNEKTMSLSRMLEEKDKLHNAFVEESRSMQRKAREEVRRILEEQEKMSNELDEKMRKLDTWSRDLNKREVLTDQERQKLDEDKKKKDLRNESLQLASKEQKIADANVFKLVEQQKREKEEALNKILQLEKQLDAKQKLEMEIEELRGKLQVMKHLGDQDDAAIKKKMEEMTAELTDKIESLEDMESMNQTLIVKERQSNDELQEARKELIEGLNAMMTRPKATNIGTKRMGELDEQVFLNACKKRYFEEGGVKGMELCSFWQENVKNSNWHPFKVIRENDTHVSVIDEDDEKLKKLKQEWGDEVYSAVVTAVKEVNEYNPSGGYAVWELWNFKEKRKATLKEVITYIVEQMKQLKRKR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00038 626 Coils Coil 432 487 - -
Tsu06g00038 626 Pfam XH domain 496 625 IPR005379 -
Tsu06g00038 626 Coils Coil 339 359 - -
Tsu06g00038 626 MobiDBLite consensus disorder prediction 1 15 - -
Tsu06g00038 626 CDD RRM_like_XS 118 214 IPR005380 GO:0031047
Tsu06g00038 626 Gene3D XS domain 111 270 IPR038588 -
Tsu06g00038 626 Coils Coil 248 268 - -
Tsu06g00038 626 PANTHER RIBONUCLEASE P SUBUNIT P38 4 626 IPR045177 GO:0080188
Tsu06g00038 626 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
Tsu06g00038 626 Coils Coil 291 332 - -
Tsu06g00038 626 PANTHER FACTOR OF DNA METHYLATION 1-RELATED 4 626 - -
Tsu06g00038 626 Coils Coil 379 423 - -
Tsu06g00038 626 MobiDBLite consensus disorder prediction 1 22 - -
Tsu06g00038 626 Pfam XS domain 116 215 IPR005380 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00038 Tsu-Chr6 345096 350543 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00038 - - mtr:MTR_4g131350 1069.3