Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00026 atgaaaaggaaaagaacaACAAGAAACTCTCTCAAATCTTGTTCTTCTTCAGAATCACTTTCTCAAACAGAATCAATCGAAGCTTTCCATTTACCTGATGATTGCTGGATATCCATCTTCAGAGAGATCATCGATGGTGATGACGACAACAACCTCTGCTACTTGCAACCTCTTTCACTCGCTTCCAAACACTTCCTCTCCATCACCAACCGTCTCCGATTCTCTCTCACTATCTCCAACCCAACACTCCAATATTCCATTCCGACCTTATTCCACAGGTTCCTCAATCTCACCTCCCTCCACATCACTATCTTCCAAGGTAAGCTTAACTCTCTTCTCTGCCAAATTTCCAAATTCCCATTCAAACTCAAATCGCTTAAACTCTCTAACCAAACTCAATTCCCCGCAAAAGGGTTACGGGCTTTGTCCAAAACGATTACAACTGTAACCTctttcacatatttatacattGATAATATTGATAACAATGACTTTGTTCTTGTCTCCCATTGTTTCCCTTTACTTGAAGAACTTGATATGCAACATAACAGAATGTGTTTTCAAGGTGTTGAAGTTGGGTTAAAGGCTATGTTAACTGCGCTTCCTAAACTTCGCAAGATTAATCTCTCTGGTTATTACTTCATAAACGACTTGTTACTTTTGTACTTGTGTAATAATTGTGAGTTTCTTGAAGACATTATAATGTTGAAATGCCCATTATTAACTCGTCATGGCATTGCTTCTGCCATTCGCCAAAGACCAACTTTGAGGTCTCTCTGCTCATATCAATGTGGCAACATTAGTTCACACTTTATTGACTCGTTGTTGAGTTTGAAGGGATTAACTTGTCTTGATTTGTCGTATGCAAACATTTCGGATGAGTTGTTTACCTCTATTGCAACAGAAGACCTTCCTTGGAGAAGGCTTGTCCTTCAATATTGCAACGGCTATAGTTTTGCTggaattttttctttgttatctAAGTGTCGATGTATACAACATTTGGATCTTAAAAAGGCTGATTTTCTTATTGATCACCATGTTGTCAATTTGTCTTTATTTCTTGCCGATTTGGTATCTATAAACCTTAGCGAATGTTGTAAGCTCACAGATTCAGCCTTGTTTACACTTGTTAATAAATGTCCTTTACTTAGTGATATCAAAATGGAGCACACAAGTATTGGAGAAAACATTGTAGAGAATTCTAATTctttgttgaattttgttttgaaccCTCCGTTAAAGTCTCTCTATCTGGCTCACAGTTCATTGTTAACAGATGAAAGCCTCATAATGATGGCTTCCCTTTTCCCCAATTTGCAGTTGCTTGATTTGAGCAATTGCGATAACATATCTGGAGAAGGTATTTGTCAAGTTTTAACTAGATGCTGTAAGATTAGACATTTGAACTTAGACTATTGTTCAGGAGTGAAGCTGCGTGGAATGAACTTGGAATTTCCTAAATTGGAGGTGTTGAACTTATCCCATACAAGTATTGATGATGAAACACTTTATGTGATCTCAAAGAATTGCTGTGGGCTTTGGCAACTGCTATTGGAAAGTTGTGGAAATGTCACAAACAAAGGTGTGAAGCATGTGGTAGAGAACTGCAGTAAACTCAGAGAGATCAATTTGAAAAGTTGTGATAAAGTGTGTGCTGATATTGTTGACAGTATGGTACATTGGAGGCCATCTTTGAGAAAGATAACTGTTCCACCTAGTTTTCGTTTAAAACTCGACCTCAATTTCCctaataaattagaaaattatgATAGCTTACAAAATGGAGTAAAGGCTCTTTCAGCAAAACTTTTGAAACTTCGAAAGGTCAATCTCACTAGTCATCACTATATCAACAATCAATTGCTTGTCCACTTGTTCAACAACTGGAAGCTTCTTGAAGAGGCTGTCATATTTTATTGTGATCAAATAACCAATACTGGTATTGCTTCTGCAATCCGTGGGAGACCAACTTTGAGGTCTTTATCCTTTACGAGTGATTTTGGTCCGAAAAACAGTGCGACATCTTTTGCACGGGATGCAGCTGCACTGTTACTTGGGTTAAACTTTGAAGTTCCCAACCTAGAGGTATTGAACTTGTCGAAAACAGAAGTTGATTATGAAAGACTCTATGTAATCTCAaaattttcgtgggcttttgcAACTACTAGTGCGATATTGTTCTGGTGTCACAGAAAAGGGAGTGAAGCATGTGGTAGAAAATTGCACACAATTGAGAGAAATCAGTTTAAGGGGTTGCAGTAA 2265 0.3625 MKRKRTTRNSLKSCSSSESLSQTESIEAFHLPDDCWISIFREIIDGDDDNNLCYLQPLSLASKHFLSITNRLRFSLTISNPTLQYSIPTLFHRFLNLTSLHITIFQGKLNSLLCQISKFPFKLKSLKLSNQTQFPAKGLRALSKTITTVTSFTYLYIDNIDNNDFVLVSHCFPLLEELDMQHNRMCFQGVEVGLKAMLTALPKLRKINLSGYYFINDLLLLYLCNNCEFLEDIIMLKCPLLTRHGIASAIRQRPTLRSLCSYQCGNISSHFIDSLLSLKGLTCLDLSYANISDELFTSIATEDLPWRRLVLQYCNGYSFAGIFSLLSKCRCIQHLDLKKADFLIDHHVVNLSLFLADLVSINLSECCKLTDSALFTLVNKCPLLSDIKMEHTSIGENIVENSNSLLNFVLNPPLKSLYLAHSSLLTDESLIMMASLFPNLQLLDLSNCDNISGEGICQVLTRCCKIRHLNLDYCSGVKLRGMNLEFPKLEVLNLSHTSIDDETLYVISKNCCGLWQLLLESCGNVTNKGVKHVVENCSKLREINLKSCDKVCADIVDSMVHWRPSLRKITVPPSFRLKLDLNFPNKLENYDSLQNGVKALSAKLLKLRKVNLTSHHYINNQLLVHLFNNWKLLEEAVIFYCDQITNTGIASAIRGRPTLRSLSFTSDFGPKNSATSFARDAAALLLGLNFEVPNLEVLNLSKTEVDYERLYVISKFSWAFATTSAILFWCHRKGSEACGRKLHTIERNQFKGLQ 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00026 754 Gene3D Ribonuclease Inhibitor 5 277 IPR032675 -
Tsu06g00026 754 Gene3D Ribonuclease Inhibitor 577 719 IPR032675 -
Tsu06g00026 754 Pfam Leucine Rich repeat 438 456 IPR001611 GO:0005515
Tsu06g00026 754 PANTHER NODULIN-LIKE PROTEIN 28 275 - -
Tsu06g00026 754 PANTHER NODULIN-LIKE PROTEIN 413 564 - -
Tsu06g00026 754 SMART LRR_CC_2 120 145 IPR006553 -
Tsu06g00026 754 SMART LRR_CC_2 604 629 IPR006553 -
Tsu06g00026 754 SMART LRR_CC_2 355 380 IPR006553 -
Tsu06g00026 754 SMART LRR_CC_2 411 436 IPR006553 -
Tsu06g00026 754 SMART LRR_CC_2 511 536 IPR006553 -
Tsu06g00026 754 SMART LRR_CC_2 437 462 IPR006553 -
Tsu06g00026 754 SMART LRR_CC_2 201 226 IPR006553 -
Tsu06g00026 754 SMART LRR_CC_2 486 510 IPR006553 -
Tsu06g00026 754 SMART LRR_CC_2 227 252 IPR006553 -
Tsu06g00026 754 SMART LRR_CC_2 537 558 IPR006553 -
Tsu06g00026 754 Gene3D Ribonuclease Inhibitor 278 399 IPR032675 -
Tsu06g00026 754 SUPERFAMILY RNI-like 595 703 - -
Tsu06g00026 754 PANTHER UNCHARACTERIZED 413 564 - -
Tsu06g00026 754 Gene3D Ribonuclease Inhibitor 400 477 IPR032675 -
Tsu06g00026 754 Gene3D Ribonuclease Inhibitor 478 576 IPR032675 -
Tsu06g00026 754 PANTHER UNCHARACTERIZED 593 715 - -
Tsu06g00026 754 PANTHER UNCHARACTERIZED 28 275 - -
Tsu06g00026 754 PANTHER NODULIN-LIKE PROTEIN 593 715 - -
Tsu06g00026 754 SUPERFAMILY RNI-like 309 571 - -
Tsu06g00026 754 SUPERFAMILY RNI-like 74 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00026 Tsu-Chr6 277306 280774 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00026 K10268 - gmx:100819538 499.204