Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00025 ATGGCAGCCGATTTCGATTTACCAAATGAGTGTTGGGAATGTGTGATCAAATTTCTCCATTCTGACCATTGCAGCTTGGAGTCTCTCTCCCTTGTCTCAAAACAATTCCTCTCTGATACCAACCGCCTCAGATTCTCTCTCACTATCAGTGACCCAACCATCCCTTTCCTCCCTCGCCTTTTCCACAGGTTCACCAACCTCACCTCCCTGGACCTCACGTTCTTTTCCGGTGACCTCAATGCACTTCTCCGCCAAATCTCTTATTTTCCCTTTTATCTCAAATCACTTAAACTCGGCAAACACTACCCCATCCCCGAAGATGGATTTCGAATTTTGGCCACAAAGATGAAAACATTGACCTCTCTCACTGCTTTCATAACTAAAACTGACATTGTCCTCATTGCTGAATGTTTTCCTTTCCTTGAAGAAGTTGACCTTAACTTTCCTAAATCGAATGATAGGGATACAAATATATTGCCATTGGCACTTCCCAAACTCCGCAAGATTAATATCTCAgGTTATTACTCCATTGACGACTCATCGCTTTTCCATCTGTGCAAGATCTGCGAGTTTCTTGAAGAGCTAGTCATAGTCATGTTTGCATATTGTAAATATTTAACACATATTGGCATTGCTTCTGCAATTTGCGAGTCACCAAATTTGAAGTCTTTCACAATTTCTTTTAATGATATTGAAATGATGTATGTTAGTTCGAAGGTGATTAACTCTATAGGGAGTTTGAAAAGTTTGAGCTGTCTCAATTTGTCATATGTGCTTATTTCAGATCGTTCGCTCACATCTCTTGCAGAGGCAGGTCTTCCTTTGAAGAGACTAGTAATCAAAAGATGTATGCATTATAGTTATGCTGGAATCTTTTGTTTGTTATCCAAGTGTCGGTTTTTACAACATTTGGATCTTGAATCTGTCCATTTTTTAATtgatcaacaagttgctgagtTGTCTTTGTTTCTTGGTAATTTGGTGTCTATAAACCTAAGTCATAGTAAGATGCTCACAGATTTAGCCTTATTTGCACTCGTTAAGAACTGTCGTTTCCTTGGTGATATTAGAATGGAATACACGGGTATTGGACAGTTTTCTTTAGAAAATTATAATTCTTCGATGGATTTCGTTGTATACCCTCAAGTGAAGTCTCTCCATTTAGCTAACAATTCATGGTTAAGTGATGAAAGCATGAAAAAGTTTGCTTCCATTTTCCCAAACTTGCAGGTGCTTGACACAAGCGATTGCGATTTAACTGAAAGTATTGTTGAAGTTTTAAGATCTTGTAAAATTATGCATTTGAGCTTGATAGAGTGTCCAAAACTGGAGCTACTTGGGATGGACTTTCAAGTTCCCAAATTGGAGATATTGAACTTGTCGAAGTCAGAAATTGATGATCAAACACTCTATATGATCTCAAAGAATTTCTCTAGGCTACGACAATTGGACTTGCAACAGTGTTATCGTATCACAGAGAAGGGAGTGAGGCAAGTAGTAGAAAATTGCACACGACTGAGAGAGATAAATATACGGTATTGCCGTAATGTGGCTGCTGATGTTGATTTCTGGTTGGCAATGGTGTTTTTAAGGCCATCATTGAGAAAGATTATCGCTCCGTCTCATTTTGGCCGTAGTGACAGCAAGTGGATACCTTTATTGGATCATGGATGCCTTGTTTGCTAG 1686 0.3837 MAADFDLPNECWECVIKFLHSDHCSLESLSLVSKQFLSDTNRLRFSLTISDPTIPFLPRLFHRFTNLTSLDLTFFSGDLNALLRQISYFPFYLKSLKLGKHYPIPEDGFRILATKMKTLTSLTAFITKTDIVLIAECFPFLEEVDLNFPKSNDRDTNILPLALPKLRKINISGYYSIDDSSLFHLCKICEFLEELVIVMFAYCKYLTHIGIASAICESPNLKSFTISFNDIEMMYVSSKVINSIGSLKSLSCLNLSYVLISDRSLTSLAEAGLPLKRLVIKRCMHYSYAGIFCLLSKCRFLQHLDLESVHFLIDQQVAELSLFLGNLVSINLSHSKMLTDLALFALVKNCRFLGDIRMEYTGIGQFSLENYNSSMDFVVYPQVKSLHLANNSWLSDESMKKFASIFPNLQVLDTSDCDLTESIVEVLRSCKIMHLSLIECPKLELLGMDFQVPKLEILNLSKSEIDDQTLYMISKNFSRLRQLDLQQCYRITEKGVRQVVENCTRLREINIRYCRNVAADVDFWLAMVFLRPSLRKIIAPSHFGRSDSKWIPLLDHGCLVC 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00025 561 PANTHER NODULIN-LIKE PROTEIN 219 359 - -
Tsu06g00025 561 PANTHER UNCHARACTERIZED 384 525 - -
Tsu06g00025 561 PANTHER UNCHARACTERIZED 219 359 - -
Tsu06g00025 561 PANTHER NODULIN-LIKE PROTEIN 384 525 - -
Tsu06g00025 561 PANTHER NODULIN-LIKE PROTEIN 1 218 - -
Tsu06g00025 561 SUPERFAMILY RNI-like 287 536 - -
Tsu06g00025 561 Gene3D Ribonuclease Inhibitor 5 353 IPR032675 -
Tsu06g00025 561 Gene3D Ribonuclease Inhibitor 448 539 IPR032675 -
Tsu06g00025 561 PANTHER UNCHARACTERIZED 1 218 - -
Tsu06g00025 561 Gene3D Ribonuclease Inhibitor 370 447 IPR032675 -
Tsu06g00025 561 SUPERFAMILY RNI-like 127 313 - -
Tsu06g00025 561 SMART LRR_CC_2 272 297 IPR006553 -
Tsu06g00025 561 SMART LRR_CC_2 324 349 IPR006553 -
Tsu06g00025 561 SMART LRR_CC_2 298 323 IPR006553 -
Tsu06g00025 561 SMART LRR_CC_2 477 502 IPR006553 -
Tsu06g00025 561 SMART LRR_CC_2 452 476 IPR006553 -
Tsu06g00025 561 SMART LRR_CC_2 247 271 IPR006553 -
Tsu06g00025 561 SMART LRR_CC_2 163 188 IPR006553 -
Tsu06g00025 561 SMART LRR_CC_2 380 405 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00025 Tsu-Chr6 273288 275292 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00025 K10268 - gmx:100819538 509.22