Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04078 TTGGCACATGCAGTTCACCATCCATCCACATCAATTTTTGAAGCTCTCTCTTCCCTTTTGTTGCCTACCTTTGGAATTTTTCCCACAACTATTCACTATTTTGGACAGTGGCCTCAGTTTGATTGGTCTGAATTCTTGCTTGACTTGGCAACTGGACAAGTAAATGATATAAGTATTCCACAAGATATTTTCAAAGATCAAGAATCTACTGACCCTTCAGCAGCTGTTATTAAGTATGTACAACTAAAGTATAAAGAAATACTTGagccaaaagaaaaagagaatcaTAAAAGAGCAAACACACCAAAACATCTTCAACTAGCCATTCAAGTTAAAAAGGAATGGACAGTAAGTTGGTTAGACCAATTTGTTATTCTTTATAAGAGATCCTTCAAAGCAAGATGCATGgaatattttgatatattaaGACTTGTTCAAGCACTTGGAATTGCACTTTTGTTAGGACTACTTTGGTGGAAATCTTCAATCAATACAGAAGCTGAACTCCGAGATCAGGTTGGTTTGATGTTctatatttgtatattttggACATCTACATGTATTTTCGGAGCTGTCTATGTATTTCCGTTCGAAAAGGTTTACTTACGGAAAGAAAGAAAAGCAGACATGTATAGACTAAGTGTATACTATGCAAGCAGTACTCTATGTGACATGATGGCACATGTTATGTATCCTACTATTTTCATGCTCATTGTGTACTTCATGGCTGGATTTAAGAACACTGCGGCTTGCTTCTTCCTTACGTTATTCGTAATTTTGCTAATAGCTATAACAAGTCAAGGGGCAGGAGAATTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGAATGGTTGCTTCTTTGATACTTATGTTATTTCTTCTTACAGGTGGATACTATGTTCAGCATATACCAAAGTTTATGCAATGGTTGAAGTATATGTCATTCATGTACTATGGATTTAGGCTTCTACTAAAAGTGCAATATTCAGGAGACCAACTATATGAATGTGAAAGTGAGGGAGGTTGTAGGCCACTTCAAACTTCACCTTCATTTGATACTGTAAACTTGAAAGGAGGTTTGAGTGAAGTTTGGGTTCTGCTAGCTATGGCTCTTTGCTTTAGGTTGTTGGCTTACTTTTGTCTCCGCAGAAGAATTGACAAAAGAAATTAG 1176 0.3529 LAHAVHHPSTSIFEALSSLLLPTFGIFPTTIHYFGQWPQFDWSEFLLDLATGQVNDISIPQDIFKDQESTDPSAAVIKYVQLKYKEILEPKEKENHKRANTPKHLQLAIQVKKEWTVSWLDQFVILYKRSFKARCMEYFDILRLVQALGIALLLGLLWWKSSINTEAELRDQVGLMFYICIFWTSTCIFGAVYVFPFEKVYLRKERKADMYRLSVYYASSTLCDMMAHVMYPTIFMLIVYFMAGFKNTAACFFLTLFVILLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYMSFMYYGFRLLLKVQYSGDQLYECESEGGCRPLQTSPSFDTVNLKGGLSEVWVLLAMALCFRLLAYFCLRRRIDKRN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04078 391 Pfam ABC-2 type transporter 122 330 IPR013525 GO:0016020|GO:0140359
Tsu05g04078 391 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 5 387 - -
Tsu05g04078 391 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04078 Tsu-Chr5 51570103 51598145 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04078 K05681 - ahf:112703852 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04078 05 51570103 51598145 Tsu05g04078 05 51570103 51598145 ECH