Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04058 ATGAGCGGCGGTGGTGGCGGGTCTAGGGTTCCGATCCCCAACAATGTACGGAAAACCATCCAAGACATCAGAGAGATCACCGGAAAACAGCATACCGACGATGAAATCTACGCCGTCCTTAAAGAATGTTCAATGGATCCCAATGAAACTGCTCAAAAGCTTCTCTATTTAgATACTTTTCATGAGGTTAGAAGGAGACGCGACAAGAAGAAGGATGGATTGAGCAGTAGGGTTTCTGAGGAGTCTAGATCAAACCAACGTGGACAGGGGAGGGGTTCAAGGGGTGCTTCAGGGGGCTATTCCTCAAACTTTCTTGATGGTGGGAGGAGCCTTGCTATTCGAAGGGAAAATGGACTCCATCACACTGCAGAAAGAACTCGTGCTTCCTCTACTCAGCCAGATTTACAGAAACAAATTAATACAGCACCTCAAATCTTAAgTGATTCAGCTGTTGCACCCCATAGTGCTGCAAATCAATCCAATGGCAAGTCTAGTCATGGTTCTTCTGGCCAATCTCTCTTAGGTAGTGTAGCAAGTGTCCCTAAAAGCAGTTCAGCTGCTAATGACACTGTCACTAAAGAAAATGTCCTACCTCAAGCAGTTGTTGTTGCAGCAATCACTTCCCCTACTCAAACCTTTGCCTCAATTACAAGAACTAATCAAGGAAAATCTCTATCAAGTTCGGATCAACATCAAATTTCTGTATCTGGCGTTTATTCCTCTTCAGATCGTGTGCTGCCACCATCTATCACCCGGAATCCTGGTGTTGGCGGTGTTATCAGTAGGGAAGTAGGGAGTGGCCAGATATCTGCTGGGCCGAATCATGTTAAAGGAAACAACCTTGAAGAAGCTGGTGATTTATCAGCATCCAAGAATGAAAAGTCCGGGTCAATGAATTCAAAAAGCAACCTGAATGAAATACAGAAGACAAATGAAGTTGAAGGTAACCAGTTATCTGAGCCTTTGCAACTCCCTTCCTCTTCATCATTGAATAGTTCTTTGAGGCCATCTTCCAGTTGCGTTAGCCAACCACCACAAGATGTTTCTGAAACAGCCGATGTCACCGAGGTCTCAACGTCAGAAGTTCATGTGCAATCAACTGAATTGAGACAACATGTTACTTTTCCAAACCATTTCCAAGTGCCTGAGTCTTTGAAAGGTGGTCTGACATTTGGAAGCTTTGATACTTTTGGGCCAAGTGGTACATCTAGTAGTGTAACTGGTTGTGATGATAGCACTTCTCCCGCTCCTGAATCTTCACCAGGGAATGATGAAGCTGTTACTTTGGGCAACCAAAGTGCCCCATTGACTGAACACGGAGGTCATCTTGATTATGCACATTCTTCATCTTTTCTAATTAATAAGACACCGGCTTCAGAAGGCATTTCTATAACTGGTAATGATTCAAAGGTTGAGCAGCCAAAGCAGGAGGTACTGTTAACTCCCGAGGGCCATCCAATTCTGACTGTTCCAAGTGCTCAAAATTATGGTTTGAATTTCATGTCTACCATGTTAGGGACTCAGCAAGTTCAATTTGAGGGTAGTGAGATTCAGGCGCAAGAAACATCACACTTTCCTTCCTTTGTTACTGCAAGTTCTCAGACTGTGTCCCCCAGCCCAACTCCACCTCTACAGAGCTCTGTACCTGTATCTCCACAGCAAGTATCTTATTTTAGGCCACCATACCCAGCCAACTTCTTCCCATATGGCCCATACTATCCCCCAATTTATGTGTCTCCGATGCATCAATTTTTAAGCCACAATGGTTTCCCTCAACAGCCATCAGCTGGCAACATGTATCTACCAGCCGCAGCTGCAGCTGCTGGAATAAAATTCCCTCTTCCGCAATTCAAGGCTGGAGCAAACACAGGAAATATGGCTCATATTGGAATTCCTTCTGGATCATATATCACTCCACCTGTTGGATATGCTCCTAGTCAGACAGTGAATACTGGAAGCTCTGCCGGAACTGAAGATATTGCAGTGTCTCAGCTGAAGGAAAACCAAATTTATACAACTGGACAACTGAGTGAAGGCTCTGCTGTGTGGATACATGCACCAGGCCAAGATATATCCAGTTTGCAACTCAATTCTCTATATAACCTTACTCCTCAGGGCCAACATCTCAACTTCCCCCAGACCCAGGCTGCTCACGGAGTATTTCCTGGTATCTATCAACAAGGGCAGACAGTAGCTTCACCGTCTACCCTTTTGCAGCAGTCTCCAGCTGTCGCTGGGCCTGTTGAAACTGTAGGCCCCCCTCCAGGATCTTATCAGCAGCCTGCACCTGCACAAATCAAttggaattctaatttttaG 2319 0.4493 MSGGGGGSRVPIPNNVRKTIQDIREITGKQHTDDEIYAVLKECSMDPNETAQKLLYLDTFHEVRRRRDKKKDGLSSRVSEESRSNQRGQGRGSRGASGGYSSNFLDGGRSLAIRRENGLHHTAERTRASSTQPDLQKQINTAPQILSDSAVAPHSAANQSNGKSSHGSSGQSLLGSVASVPKSSSAANDTVTKENVLPQAVVVAAITSPTQTFASITRTNQGKSLSSSDQHQISVSGVYSSSDRVLPPSITRNPGVGGVISREVGSGQISAGPNHVKGNNLEEAGDLSASKNEKSGSMNSKSNLNEIQKTNEVEGNQLSEPLQLPSSSSLNSSLRPSSSCVSQPPQDVSETADVTEVSTSEVHVQSTELRQHVTFPNHFQVPESLKGGLTFGSFDTFGPSGTSSSVTGCDDSTSPAPESSPGNDEAVTLGNQSAPLTEHGGHLDYAHSSSFLINKTPASEGISITGNDSKVEQPKQEVLLTPEGHPILTVPSAQNYGLNFMSTMLGTQQVQFEGSEIQAQETSHFPSFVTASSQTVSPSPTPPLQSSVPVSPQQVSYFRPPYPANFFPYGPYYPPIYVSPMHQFLSHNGFPQQPSAGNMYLPAAAAAAGIKFPLPQFKAGANTGNMAHIGIPSGSYITPPVGYAPSQTVNTGSSAGTEDIAVSQLKENQIYTTGQLSEGSAVWIHAPGQDISSLQLNSLYNLTPQGQHLNFPQTQAAHGVFPGIYQQGQTVASPSTLLQQSPAVAGPVETVGPPPGSYQQPAPAQINWNSNF 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04058 772 MobiDBLite consensus disorder prediction 400 442 - -
Tsu05g04058 772 PANTHER GBF-INTERACTING PROTEIN 1-LIKE 3 772 - -
Tsu05g04058 772 SUPERFAMILY UBA-like 12 73 IPR009060 GO:0005515
Tsu05g04058 772 MobiDBLite consensus disorder prediction 65 106 - -
Tsu05g04058 772 MobiDBLite consensus disorder prediction 79 104 - -
Tsu05g04058 772 MobiDBLite consensus disorder prediction 151 191 - -
Tsu05g04058 772 Pfam GBF-interacting protein 1 N-terminal 12 71 IPR009719 -
Tsu05g04058 772 PANTHER FLOCCULATION PROTEIN (DUF1296) 3 772 IPR044277 -
Tsu05g04058 772 MobiDBLite consensus disorder prediction 400 435 - -
Tsu05g04058 772 MobiDBLite consensus disorder prediction 235 302 - -
Tsu05g04058 772 MobiDBLite consensus disorder prediction 320 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04058 Tsu-Chr5 51362878 51369151 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04058 - - gmx:100819602 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04058 05 51362878 51369151 Tsu05g04058 05 51362878 51369151 ECH