Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04057 ATGGGAAGCAACGATTTGAAGTACGAGGTTTCACAAAACGCTTACATCAAACTCGTTCTCCACTCTCTCAAACACCCTACATCCGCCGTCAACGGCGTCTTGATCGGCCGCATCTCCAATGACACCGTCGAGATCACCGATACCGTTCCTCTCTTTCATTCTCAAATCCCTCTTCTTCCTCAATTGGAGATCTCTCTCATTCTGATAGAGGAATATTTTTCTGCCAAAGGGTTGAACATAGTTGGTTATTTTCATGCTAATGAGAGGTCTGATGAATTTGAGCTTGGTGGTGTGGCGAAGAATATTGGTGATCATATCAGTCGTTACTTTCCTCAAGCTGCTATTCTATTGTTAGATAACAAGAAGCTTGAAGCTTTGAAAAAGAGCAAGGGTAGCGGTGCTGTAACACAGCTTTATGTTAGGGATGCGTCTAAGAACTGGAAGTTGGTTCCATCAGATGCAAACAACCGATTCTCTCTGAAAGAGCCATCAGCAAATCTCATCTTATTGGATTATATTTCATCTGAGAAATATAGAGACATTGTAGATTTTGATGATCACCTTGATGACATAAGCAAgGATTGGCTAAACCCAGGGCTTTTCAACTAA 609 0.4154 MGSNDLKYEVSQNAYIKLVLHSLKHPTSAVNGVLIGRISNDTVEITDTVPLFHSQIPLLPQLEISLILIEEYFSAKGLNIVGYFHANERSDEFELGGVAKNIGDHISRYFPQAAILLLDNKKLEALKKSKGSGAVTQLYVRDASKNWKLVPSDANNRFSLKEPSANLILLDYISSEKYRDIVDFDDHLDDISKDWLNPGLFN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04057 202 CDD MPN_UPF0172 10 197 IPR005366 GO:0072546
Tsu05g04057 202 Pfam Uncharacterised protein family (UPF0172) 7 199 IPR005366 GO:0072546
Tsu05g04057 202 Gene3D Cytidine Deaminase, domain 2 6 87 - -
Tsu05g04057 202 PANTHER BNAA03G11160D PROTEIN 2 202 - -
Tsu05g04057 202 PANTHER ER MEMBRANE PROTEIN COMPLEX 2 202 IPR005366 GO:0072546
Tsu05g04057 202 ProSiteProfiles MPN domain profile. 8 139 IPR037518 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04057 K23569 - gmx:100527135 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04057 05 51355277 51357920 Tsu05g04057 05 51355277 51357920 ECH