Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04056 ATGGCAGGAGTTGTTGAAGATACATCTCCTATTCATACTAAGGACCATGATGAATCCAAACTTGCCATTGATGATGATGCCGACAAAGAAGTGGATGATTCTCCTATAGAGCAAGTCAGACTAACAGTGCCAATAACAGACGATCCTACGCAACCAACACTGACATTTAGGACATGGACTATTGGTTTGGGATGTTGCATTATCCTTTCCTTTGTGAACCAATTCTTTGTGTACAGAACAAACCCTCTAACTATCTCTTCTATCACAGCACAAATAGCTTCTCTCCCACTTGGGAAATTAATGGCTGCAACACTTCCAACCACTATATATAAAGTCCCCTTTACTCCTTGGTCTTTCACATTGAATCCTGGACCATTCAATTTGAAGGAACATGCCCTTATAACCATTTTTGCTAGTGCTGGAGCTAGTGGTGTTTATGCCATTAACATAATCACTATTGTTAAGGCTTTCTATCACAGGAGTATCAATCCAATTGCTGCTATTTTGTTAGCACTGTCAACTCAGATGCTTGGTTATGGATGGGCTGGTATATTCAGAAAGGTCCTTGTGGACTCTCCCTACATGTGGTGGCCTTCTAATCTTGTTCAGGTGTCTCTATTCAGGGCATTTCATGATAAAGAAAAGAGGCCTAAAGGAGGAAACACAAGGTTGCAATTCTTTTTACTGGTCTTTGTGACTAGCTTTGCTTATTACATTATTCCAGGATACTTTTTCCAAGCAATATCAACCATCTCTGTTGTTTGCTTAATATGGAAAAACTCTGTCACTGCTCAACAGATTGGTTCAGGAATGCGTGGTCTTGGTATTGGTTCATTTACCCTAGATTGGAACACTGTTGTTGCTTTCTTAACAAGTCCATTGGCTTATCCTGGTTTTGCCATCATTAACATGTTGGTTGGATTTGTGTTGTATATCTATGTTGTGATTCCCATTGCCTATTGGAACAATTTTTATGATGCCAAAAAGTTTCCCCTCATCCATTTTCACACATTTGATTCCACTGGTGCAATATATAATGTTTCTAGGATTCTTAATGATGCAACCTTTGACATTGATATGGATGCTTATAACAATTACAGTAAGCTCTATCTTAGTATCACATTTGCATTTGAATATGGATTGTGCTTCGCGACTCTAACTGCAACCGTCTCACATGTTTTCCTCTTCCATGGAAAAACGATTAATCAGATGTGGAGAAAGACAACAGCCACGCTAAAAGAGCAAGCCGGAGACGTGCATACAAGAATCATGAAGAAAAACTATGAACAAGTCCCTCAGTGGTGGTTCATAAGCATTTTGGTTCTTACAACTATTATGGCCTTGATATGTTGCGAAGGTTTTGGCAAGCAGCTCCAACTTCCATGGTGGGGAGTCTTGCTTTCACTTACAATTGCATTGGTTTTTACTTTGCCAGTTGGTGTCATTCAAGCAACAACAAATCTGCAAGCTGGACTTAATGTGATCACAGAGTTGATCATTGGTTACATTTATCCTGGAAAGCCCCTTGCCAATGTAGCCTTCAAGACTTATGGATACATCAGCATGGCACAAGCACTTAGTTTCCTCCAAGATTTCAAATTAGGCCACTACATGAAAATTCCTCCAAAATCTATGTTTGTAGTACAGTTGGTAGGAACTTTGGTTGCTTCAAGTGTATACTTCAGCACAGCATGGATGCTTCTAACAACTATTCCACACATATGTAATCCATCAATGTTGCCAAAGGGTAGTCCATGGACTTGTCCTGGTGATGATGTGTTTTACAATGCTTCAATCATATGGGGAATAGTAGGACCAAAAAGGATGTTCACAAAGGATGGAATTTACCCTGGATTGAGTTGGTTTTTCCTCATAGGTCTACTTGCGCCTGTTCCAGTGTGGCTGCTAGCTCGCAAATATCCGAATCACAAATGGATCGAACTCATCAACATGCCACTTATAATTGCAGGTGCCAGTCAAATACCACCGGTTAgatcaataaattatatttcatgGGGAATCGTTGGAATCTTCTTCAACTTCTATGTTTACAAACATTTCAAGTCATGGTGGGCTAGACACACTTACATTCTGTCGGCAGCTTTAGATTCTGGCATTGCTTTCATGGGTGTGTTGCTATATTTTTCACTTCAATCTTATGATAACAATGGTCCAGCATGGTGGGGTCTTGAAGGAGATGATCATTGTCCCTTGGCTCAATGCCCTACAGCTCCCGGTGTTGTTACCGAGGGATGTCCTTCCTTCTTTTGA 2271 0.4007 MAGVVEDTSPIHTKDHDESKLAIDDDADKEVDDSPIEQVRLTVPITDDPTQPTLTFRTWTIGLGCCIILSFVNQFFVYRTNPLTISSITAQIASLPLGKLMAATLPTTIYKVPFTPWSFTLNPGPFNLKEHALITIFASAGASGVYAINIITIVKAFYHRSINPIAAILLALSTQMLGYGWAGIFRKVLVDSPYMWWPSNLVQVSLFRAFHDKEKRPKGGNTRLQFFLLVFVTSFAYYIIPGYFFQAISTISVVCLIWKNSVTAQQIGSGMRGLGIGSFTLDWNTVVAFLTSPLAYPGFAIINMLVGFVLYIYVVIPIAYWNNFYDAKKFPLIHFHTFDSTGAIYNVSRILNDATFDIDMDAYNNYSKLYLSITFAFEYGLCFATLTATVSHVFLFHGKTINQMWRKTTATLKEQAGDVHTRIMKKNYEQVPQWWFISILVLTTIMALICCEGFGKQLQLPWWGVLLSLTIALVFTLPVGVIQATTNLQAGLNVITELIIGYIYPGKPLANVAFKTYGYISMAQALSFLQDFKLGHYMKIPPKSMFVVQLVGTLVASSVYFSTAWMLLTTIPHICNPSMLPKGSPWTCPGDDVFYNASIIWGIVGPKRMFTKDGIYPGLSWFFLIGLLAPVPVWLLARKYPNHKWIELINMPLIIAGASQIPPVRSINYISWGIVGIFFNFYVYKHFKSWWARHTYILSAALDSGIAFMGVLLYFSLQSYDNNGPAWWGLEGDDHCPLAQCPTAPGVVTEGCPSFF 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04056 756 MobiDBLite consensus disorder prediction 9 27 - -
Tsu05g04056 756 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 38 717 IPR004813 GO:0035673
Tsu05g04056 756 PANTHER ISP4 LIKE PROTEIN 27 753 IPR004648 GO:0055085
Tsu05g04056 756 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 32 720 IPR004648 GO:0055085
Tsu05g04056 756 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 27 753 - -
Tsu05g04056 756 MobiDBLite consensus disorder prediction 1 33 - -
Tsu05g04056 756 Pfam OPT oligopeptide transporter protein 54 716 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04056 Tsu-Chr5 51350154 51353989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g04056 1 755 Organic Solute Cotransporters AT4G26590 64.503 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04056 - - gmx:100776230 1288.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04056 05 51350154 51353989 Tsu05g04056 05 51350154 51353989 ECH