Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04054 ATGGCAGGGGTTGCCCATACATTCCATATTGAAACTAAGGAAGACCTGCATGAATCTAAACTTGCCATTGCAGATGATAAAGACATAGAAGTGGATGATTCTCCAATAGAGCAAGTCAGACTGACAGTCCCTATAACAGACGACCCTACACAACCAGTCCTAACATTTAGGACATGGACTATTGGTTTAGGATGTTGCATTATCCTTTCCTTTGTGAACCAATTCTTTGGGTACAGAACAAACCCTTTATCTATCTCCTCTATTGCAGCACAAATAGTTTCACTCCCACTTGGGAAACTAATGGCTGCAACACTTCCAACCACAATATATAAAGTCCCTTTCACTTCTTGGTCTTTCACATTGAATCCTGGACCCTTCAATTTAAAGGAACATGCCCTTATAACCATCTTTGCTAGTGCTGGATCTAATGGTGTTTATGCCATTAACATAATCACTATTGTTAAGGCTTTCTATCACAGGAATATCAATCCAACTGCTGCTTTTTTACTAGCACTGTCAACCCAGATGCTTGGTTATGGATGGGCTGGTATATTCAGAAAGGTCCTCGTGGACTCTCCTTACATGTGGTGGCCTTCAAATCTTGTTCAGGTGTCTCTATTCAGGGCATttcatgaaaaagaaaagaggcCTAAAGGAGGAAACACAAGGTTGCAATTCTTTTTCCTGGTCTTTGTGGCAAGCTTTGCTTATTACATTATTCCAGGATACTTTTTCCAAGCAATATCAACCATCTCTGTTGTTTGCTTAATATGGAAAACCTCTGTCACTGCTCAACAGATTGGTTCAGGAATGAGGGGTCTTGGTATTGGTTCATTTACCCTCGATTGGAACACTGTTGCTGGTTTCTTAGGAAGTCCTTTAGCTTATCCTGGTTTTGCCATCATCAACATATTGGTTGGATTTGTGTTATTTATCTATGTTGTGATTCCAGTTTCCTATTGGAGCAATCTTTATCATGCCCAAAAGTTTCCCCTCATCAGTTCTCACACATTTGATTCTACTGGTGCAATATATAATGTTTCTAGGATTCTTAATGATGCAACCTTTAACATTGATATGGATGCTTATAACAATTACAGTAAGCTCTATCTTAGTATCACATTTGCATTTGATTATGGATTGAGCTTCGCAACTCTCACAGCCACAATCTCACATGTTCTCCTCTTCCACGGAAAAACGATTACTCAGATGTGGAGAAAGACAACAGCCACGCTAAAAGAGCAAGCTGGAGACGTGCATACAAGAATCATGAAGAAAAACTATGAACAAGTCCCTGAGTGGTGGTTCATAAGCATTTTGGTTCTTACAACTATTTTGGGCTTGATATGTTGTGAAGGCTTTGGCAAGCAGCTCCAACTTCCATGGTGGGGATTCTTGTTTTCTCTTACAATTGCATTGGTTTTTACTTTGCCAATTGGTGTCATTCAAGCAACAACAAATCTGCAAGTTGGACTTAACGTGATCACAGAGTTAATCATTGGTTACCTTTACCCTGGAAAGCCCCTTGCTAATGTAACCTTCAAGACTTATGGATACATTAGTATGTCACAAGCACTTGGTTTCCTCCAAGACTTCAAATTAGGCCATTACATGAAAATTTCTCCAAAATCTATGTTCCTAGTACAGTTGGTAGGAACTTTGATTGCTTCAAGTGTACAGTTTATCACAGCATGGTGGCTTCTAACAACTATTCCACACATATGTGATGAATCAATGTTGCCAGAGGGTAGTCCATGGACTTGTCCTGGAGATACTGTGTTTTATAATGCTTCAATCATATGGGGAATAGTAGGACCACAAAGGATGTTCACAAAGGACGGAATTTACCCTGGATTGAATTGGTTTTTCCTCATCGGTCTACTTGCGCCTGTTCCAGTGTGGCTGCTAACTCGCAAATACCCGAATCACAAATGGATTGAACTCATCAACATGCCACTTATCATTGCAGGGCCCCATGGAATACCACCGGTTAgatcaataaattatatttcttgGGGAATCGTTGGAATCTTCTTCAATTTCTACGTTTACAAACGTTTCAAGTCATGGTGGGCTAGACACACTTACATTCTATCAGCTGCTTTGGATGCGGGCATTGCTTTCATGGGTGTGTTACtatatttttcacttcaaaCTTATGATATCAATGGTCCGGCATGGTGGGGTCGTGAAGGAGATGATCATTGTCCCTTGGCTATATGCCCTACAGCTCCTGGTGTTGTTACCAAGGGTTGTCCTGTCTTTTGA 2268 0.3977 MAGVAHTFHIETKEDLHESKLAIADDKDIEVDDSPIEQVRLTVPITDDPTQPVLTFRTWTIGLGCCIILSFVNQFFGYRTNPLSISSIAAQIVSLPLGKLMAATLPTTIYKVPFTSWSFTLNPGPFNLKEHALITIFASAGSNGVYAINIITIVKAFYHRNINPTAAFLLALSTQMLGYGWAGIFRKVLVDSPYMWWPSNLVQVSLFRAFHEKEKRPKGGNTRLQFFFLVFVASFAYYIIPGYFFQAISTISVVCLIWKTSVTAQQIGSGMRGLGIGSFTLDWNTVAGFLGSPLAYPGFAIINILVGFVLFIYVVIPVSYWSNLYHAQKFPLISSHTFDSTGAIYNVSRILNDATFNIDMDAYNNYSKLYLSITFAFDYGLSFATLTATISHVLLFHGKTITQMWRKTTATLKEQAGDVHTRIMKKNYEQVPEWWFISILVLTTILGLICCEGFGKQLQLPWWGFLFSLTIALVFTLPIGVIQATTNLQVGLNVITELIIGYLYPGKPLANVTFKTYGYISMSQALGFLQDFKLGHYMKISPKSMFLVQLVGTLIASSVQFITAWWLLTTIPHICDESMLPEGSPWTCPGDTVFYNASIIWGIVGPQRMFTKDGIYPGLNWFFLIGLLAPVPVWLLTRKYPNHKWIELINMPLIIAGPHGIPPVRSINYISWGIVGIFFNFYVYKRFKSWWARHTYILSAALDAGIAFMGVLLYFSLQTYDINGPAWWGREGDDHCPLAICPTAPGVVTKGCPVF 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04054 755 Pfam OPT oligopeptide transporter protein 54 716 IPR004813 GO:0035673
Tsu05g04054 755 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 32 722 IPR004648 GO:0055085
Tsu05g04054 755 PANTHER ISP4 LIKE PROTEIN 21 754 IPR004648 GO:0055085
Tsu05g04054 755 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 21 754 - -
Tsu05g04054 755 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 38 718 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04054 Tsu-Chr5 51317814 51338099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g04054 14 755 Organic Solute Cotransporters AT4G26590 66.173 0.0 1051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04054 - - gmx:100776230 1321.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04054 05 51317814 51338099 Tsu05g04054 05 51317814 51338099 ECH