Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04048 ATGATGGGTAGTAACAATAACaacagagaaagagaagaaactCTCACATTCACAATtccttcatcatcttctcaTCATTCTTCACCAATTACTGTTTCTGACACACTTGATAGTTATCTTACTGACCCAAGAAGTGCTTCTGGAAGTTTCCAGAACGATGGTGTTCTTTCTGGTGGTGGTGATGCTACTGATGTTGAGTTTGGTTTCTCAAGACCTGATTTTCGACAAAGTTCTCTTGTTGGTACTGTTGAATTGTACGAACGACATGTTTTTCTTTGTTACAAGAATCCGAGGTTTTGGCCATCTAGGATTGAAGCTGCTGAGTTTGATCGGTTACCTAGGTTGCTTTATGCTGCTGTTAAAGCTAGGAAGAATCAAATGAAGAAGGAGACCCGGTTAACGATATGTGAGGGTCACGATGGGACTGAAACATCAAATGGGGATGTGTTAATTTTCCCTGACATGATCAGATACAGGAGATTGACTCATTTTGATGTTGAAACTTTTGTTGAAGAAGTTCTTGTGAAGAATGGAGAGTGGTTACCTGGAACACCTGAAACCTTGAAAGGTTCATATGTTTTTGTGTGTTCACATGGATCACGTGATCGCAGATGTGGGGTTTGTGGACCGGTTTTGGTTAGTAGATTCAGGGAAGAGATAGAGTTGCATGGTCTACAAGGTAAAGTATTTGTTAGCCCGTGCTCACACATTGGGGGACATAAGTATGCAGGCAACGTCATTATATTCGGATCAAGCATTAATGGAGAAGTCACTGGCCACTGGTATGGATATGTTGCTCCGGAGGATGTACCTTTATTGCTTCAACAACATATCATGAAAGGGGAGATTATAGACTCGTTATGGAgGGGTCAGATGGGTTTATCAGAAGAGGAGCAAATAATAAAGCAAGAACAAAGGCTTCTGCTGAATGGCATAGGAATATTAGACGAAAGCTTTGCACTGAATGAATCCGGAGAAAATTTCGCAAGCTGCTGCCAATCAAATGGAGTGAGCTGCTGCCAAGAAAACGGAGACTCTTCCTTTTGTCAGAGTCAGGTTTCAGTGGATAACAGAATGAGCTCCGATGCCATCGAGACTGAGGCAAAGCTCTCAGCCGATAACAAGAGCAGCAAGCCGGTGATTTCTCGGACCAATAGCGGGAAAGGAGCTTCACGCAAGTTTCATTCTGTGACAACATGGCTTGACGGCTGGGAGCAAGAAGATACTTATGCCGCTCTTGCTGTTGCCTGTGCTGCAGTATCGGTTACCATTGCCTATAACTGCTACAAACAATTGACATAG 1302 0.4178 MMGSNNNNREREETLTFTIPSSSSHHSSPITVSDTLDSYLTDPRSASGSFQNDGVLSGGGDATDVEFGFSRPDFRQSSLVGTVELYERHVFLCYKNPRFWPSRIEAAEFDRLPRLLYAAVKARKNQMKKETRLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVLVKNGEWLPGTPETLKGSYVFVCSHGSRDRRCGVCGPVLVSRFREEIELHGLQGKVFVSPCSHIGGHKYAGNVIIFGSSINGEVTGHWYGYVAPEDVPLLLQQHIMKGEIIDSLWRGQMGLSEEEQIIKQEQRLLLNGIGILDESFALNESGENFASCCQSNGVSCCQENGDSSFCQSQVSVDNRMSSDAIETEAKLSADNKSSKPVISRTNSGKGASRKFHSVTTWLDGWEQEDTYAALAVACAAVSVTIAYNCYKQLT 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04048 433 CDD TRX_Fd_Sucrase 190 292 IPR009737 -
Tsu05g04048 433 Gene3D Glutaredoxin 190 291 - -
Tsu05g04048 433 Gene3D Glutaredoxin 86 181 - -
Tsu05g04048 433 PANTHER SUCRASE-LIKE PROTEIN 62 432 - -
Tsu05g04048 433 SUPERFAMILY Thioredoxin-like 192 294 IPR036249 -
Tsu05g04048 433 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 62 432 IPR009737 -
Tsu05g04048 433 MobiDBLite consensus disorder prediction 369 390 - -
Tsu05g04048 433 MobiDBLite consensus disorder prediction 373 390 - -
Tsu05g04048 433 Pfam Sucrase/ferredoxin-like 79 290 IPR009737 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04048 Tsu-Chr5 51276162 51280190 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04048 - - gmx:100816329 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04048 05 51276162 51280190 Tsu05g04048 05 51276162 51280190 ECH