Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04030 ATGCAGAAACCAGAGTTCGAACCTTCGTTAGGAAATGCGGCTCAACTAGAGGATATCCAACAAAGTCAAACTTCTCAGAGTCAAGATGAAGCAAAGTCATATCCTTCATTTCCATTAGAAAGTGAAAATAACAatatcattgaaaaaaaatttgagctCAATGCTCAAAAGTATGAGCAACAAGATGATCCATATTCAGATTCTTCATTTCCATCGGATGGTGAAAGTAGTGCCGGCTCAATCATTGATGAAAGTTTTGATATTGATCTTAGGAGAAATCAAGACATGAGTTTATCTGATAGTTTTGCCACCGACGATGATGAGGAAGACGATGAGGAGGACGACAGTGGCGAAGACGAGGAGGAGGATGGTCTTATTGAAATCAATCTTCCAAGTAGCAACTTCTCTAGTTTAAATGAAGAGTATTCTAAACagaatttggattttattttcaaGGAGGAGGGTCTCATGGATCTCTTAGCAGAAATTAATGAGGATGAAAATTTAATTGAGATTGATATTTTCAATGGATCCACTAACTGCTTCAATGTTCTCTTTCAATCTCTGAATCTGCGTAAGTTGTTGAATTCAACGAAACCTGTGAAGTGCTTAGAGTGTGCAGTAAGAACTTTAGATGACACGAGTGAAAAGAAGGACTGCGAACTTATGGGAGGGAAAATCTTGGAGAATAATGCAGTTAAAGACTTGAAGGAGGATGGTATAAAAGAAATGGAAGTTGATAAGAAAACTGATGGGGAGGAAGACCTGGAAATGAAAGAGGATAAGAAAGCTGATGGGGAGGAAGTACTAGAAATGCAAGAGGATAAGAAAGCTGATGATAGTGAGGTTATAAAAGACAATAAGAAAGTTGGTGAAGACGGTAAGAAAGTTTATGTAAGGGGGAAATTAAAAGAGGCTAGGAAAAAAGTTGGCACGAAAGAAGCAAAAGATGATAAGAAAGATGATTTTGTGAATGCAATGGAAGAAAATAAGAAAGATGATAATGAGTTTGAGAAGGTTAATGAGAAGTCAAATGAAGAAGTTAAAGTAGAAGATATCAAAGTTGTGAAACGATTGAAAAAATGTGCGAGAGGAAAGACTGTTGGAGAGAAAAGTCAAGAAGCGGGGGAGGATGATAAGGTTGACGATAAGTCAAATGAAGAAGATAAAGATGATGTTAAAATTGTGAAACTATTGAAAAAGCGTGGGAGAGGAAAGGTCGATGTGGAGAAGATGGAAAACGAAATAATGGAACAGAAGGAGACAAAGGGCATCTCTGAAGGCAAAAACGAGAGCAGTGAAAAGGACGAAAAGCAAGAAAGGGAGGAGGAATGTAAGGATAAGGTTGACAATAAGTCAAATGAAGCAGATGCGGCTGAAGATATTGAAGTTGAGAAAGGATTAAAAAACCGTGGGAGAGGAAAGGTCGATGTGGAGAAGACGAAAACGAAAGTAAAGGAACAGAAGGAGACAAAGGGTATCCCTGAAGGCAAAAATGAGAGCAGTGATAACGATGAAAGGCAAGAAGGGGAGGAGGATGGTAAGGATAAGGTTGACAATAAGTCAAATGAAGAAGATGGTGCTGAAGATGTTGAAGTTGAGAAAGGATTAAAAAAGAGCGGGAGAGGAAACATCAATGCGGGGCAGgctaaaaatgaaataaaggaACTGAAGGAGACAGAGCCAAGGACTCCTACAACAACCAACCGTCCTGTACGTGAAAGGAAATCAGTTAAGAGGTTGATAGAATCAGCTGAGACAGATACATCCAAAGAATTTCACATTGAAAAGGGTCGTGGTACACCTTTAAAAGATATCCCTAATGtGGCATTTAAATTATCTAGAAGGACGGTTgatgataatttaaaattacttCATACAATCCTCTTTAGTAGGAGAGGAAAGGCTGCCGAGATTAAGAATAATATATCAAGTTTTTCTGGTTTTGCATGGGATGAAAATGAGGAAAAGcaaatgattaaaataaaagaaaaatttgacaAATGTAATAAAGAGAACTTGATGGAATTTTGCGATGTGCTTGACATGCCAGTTACGAACCCAAATACAAGGAAGGAAGATATTATTGCAAAGCTAATAGACTATCTGGTTGCTCCTAAAGAAAAGTCCATTAAAGGGAAAAAGCGCACAGCGAAACAAGGTTCATCAAGATCTGAAACAGCAACACCACGTTCTTCTAAGAGTCGGAAGAAAAATGAAGATTCTTCAGTAGCAGAGAAGAAAATGATCACAACTTACACAGAAAGTGAGTCTGTGAAAGAAGATAAAgttgaagagaaaaataaaaacaatgttCCTGACGATTCTGAAGATAAAAAGTTGATTCAAGAAAAAAAGCGCAAGCGCATAGCAAAGCAAGATTCATCGGAAACTAGAACAACAAGATCAAGACGTTCGGTTAAGAGTCGGCAAAATGAAGATTCTGAAGTAGCAGAGGTGAAAAGGAGATCAACTTACGCAGAAAATGAGGCTGAGGAAGGAcagaaagatgaaaaaaatgaagCGGAAAATGGAAAAGGTGTTGCTGACAAATCCAAGGATGAAATGCCTGAAAAATCTGAAAGTGAGGATAAAAATGATTGTACGGAATCTGAAGATGCGAAGAAAGTGAGTAAAACAACTAGAACATCTTTAAGACAGAAAGAATCTGCTGCAAAAAGCAAAGCAAAGAAAATAACAGTTGAAACAAAACCTCGCACGGCACGTAAGAGAACTTCTAATAAACCATTGTCTACGCACTCTGAGTCTGATCATGATGATAGTGAGGGAAGGCTAAAGGTCTTtgcaaggaagaagaaaaatgtaaaacaaGGAAAGCAGAAGAACTCGAGTCTCACCGAGTCTTCCTCCAAAAGCAAAACAGAAAAGGTTACTGAAAGAGAGGACAAGAGCAAAGAGAAGTCAAACCCCAGCGAAGATCAGCTACGGAAGGGAATACGTGATCTTTTCAAAGTTGTTGACTTCAATACGGCTACATTTAAGGACACTGTGGAGCTACTTGGTAAGCGATTCAACGTGGATCTCACCCCAAGAAAGGCATCTATAAAGACTATTATTCAGGAAGAGCTGACAAAACTAGTTGCAGAAGATTTGGAAAAAGAAGAAAGGGGTGAGGAGGTTGAAGATAGGTTGGAGAAGCCGTGA 3165 0.369 MQKPEFEPSLGNAAQLEDIQQSQTSQSQDEAKSYPSFPLESENNNIIEKKFELNAQKYEQQDDPYSDSSFPSDGESSAGSIIDESFDIDLRRNQDMSLSDSFATDDDEEDDEEDDSGEDEEEDGLIEINLPSSNFSSLNEEYSKQNLDFIFKEEGLMDLLAEINEDENLIEIDIFNGSTNCFNVLFQSLNLRKLLNSTKPVKCLECAVRTLDDTSEKKDCELMGGKILENNAVKDLKEDGIKEMEVDKKTDGEEDLEMKEDKKADGEEVLEMQEDKKADDSEVIKDNKKVGEDGKKVYVRGKLKEARKKVGTKEAKDDKKDDFVNAMEENKKDDNEFEKVNEKSNEEVKVEDIKVVKRLKKCARGKTVGEKSQEAGEDDKVDDKSNEEDKDDVKIVKLLKKRGRGKVDVEKMENEIMEQKETKGISEGKNESSEKDEKQEREEECKDKVDNKSNEADAAEDIEVEKGLKNRGRGKVDVEKTKTKVKEQKETKGIPEGKNESSDNDERQEGEEDGKDKVDNKSNEEDGAEDVEVEKGLKKSGRGNINAGQAKNEIKELKETEPRTPTTTNRPVRERKSVKRLIESAETDTSKEFHIEKGRGTPLKDIPNVAFKLSRRTVDDNLKLLHTILFSRRGKAAEIKNNISSFSGFAWDENEEKQMIKIKEKFDKCNKENLMEFCDVLDMPVTNPNTRKEDIIAKLIDYLVAPKEKSIKGKKRTAKQGSSRSETATPRSSKSRKKNEDSSVAEKKMITTYTESESVKEDKVEEKNKNNVPDDSEDKKLIQEKKRKRIAKQDSSETRTTRSRRSVKSRQNEDSEVAEVKRRSTYAENEAEEGQKDEKNEAENGKGVADKSKDEMPEKSESEDKNDCTESEDAKKVSKTTRTSLRQKESAAKSKAKKITVETKPRTARKRTSNKPLSTHSESDHDDSEGRLKVFARKKKNVKQGKQKNSSLTESSSKSKTEKVTEREDKSKEKSNPSEDQLRKGIRDLFKVVDFNTATFKDTVELLGKRFNVDLTPRKASIKTIIQEELTKLVAEDLEKEERGEEVEDRLEKP 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 309 347 - -
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 362 575 - -
Tsu05g04030 1054 PANTHER PROTEIN DEK 479 780 - -
Tsu05g04030 1054 PANTHER PROTEIN DEK 777 1043 - -
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 59 79 - -
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 710 983 - -
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 959 983 - -
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 753 935 - -
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 730 745 - -
Tsu05g04030 1054 Coils Coil 256 276 - -
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 386 524 - -
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 552 575 - -
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 101 126 - -
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 248 287 - -
Tsu05g04030 1054 Gene3D - 969 1032 - -
Tsu05g04030 1054 SUPERFAMILY DEK C-terminal domain 971 1030 - -
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 362 380 - -
Tsu05g04030 1054 Pfam DEK C terminal domain 977 1030 IPR014876 -
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 14 43 - -
Tsu05g04030 1054 PANTHER DEK PROTEIN 479 780 IPR044198 GO:0003677|GO:0006325
Tsu05g04030 1054 PANTHER DEK PROTEIN 777 1043 IPR044198 GO:0003677|GO:0006325
Tsu05g04030 1054 Coils Coil 435 462 - -
Tsu05g04030 1054 MobiDBLite consensus disorder prediction 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04030 Tsu-Chr5 51142111 51149636 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04030 K17046 - gmx:100818537 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04030 05 51142111 51149636 Tsu05g04030 05 51142111 51149636 ECH