Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g04019 ATGTCTCTCAGATTTCTCCGATCTCGTTTCTTTTCCGTCGCATCCAAACGATTTCTCTGCACCAATGCAGCTCCCGCTACTCCTCAACCTTCTCCTCCTTCCGTCACTTCCCCTAACCGCTGGAATTTCCTCAAATACACCGTCATCGGTGCCTTAACTGGAACCACTGTTCTCACCGGTTACGCCTCTTACGCTTATAATTTGGACGAAATTGATGAGAAAACGAAGTCGTTTCGTGAATCGACTAAGTATACTCCGGCTGATGGAGCTACTGCTCTCGATAAGTTTCAAGGGATGTTATACTCAACTGCAGTGACAGTGCCTGCTAAAGCAGTAGAGCTTTATTTGGATGCAAGAAGGTTAATTGAAGAACAAGTTAGGAGTTATACGGAACCGTACACAGACAAACTCCTTCCAGATTTGCTTCCTCAGGAGCAACATGTGTTCACACTTGTTGTAGATCTCAACGAAACATTGATTCATTATATTTGGAAGAGAGATACAGGCTGGCAGACTTTTAAAAGACCTGGAGTTGATGCTTTCTTGGAACATCTAGCCCAGTTCTATGAAATAGTGGTGTATACAGATGAACAAAATATGTTTGTAGACCCTGTTATAGAAAGGCTGGATCCCAAGCACTGCATTAGGTACAGGCTATCAAGGCCTGCTACTAAGTATCAGGATGGGAAACACTATAGAGATCTTTCAAAACTAAACAGGAATCCTGCAAAGGTTATGTACTTAAGTGGCCATGCTCTAGAAAGTAGCTTACAACCTGAAAATTCTGTTCCTATTAAGCCATGGGTGCATACTGATAAAGATGATACAGCTCTTGTGGATTTCATACCATTCCTTGAGTTTGTTGCCCGTAGTAGTCCGGCTGATATAAGACCAGTGCTACAGTCTTACCAAGGACTTGATATTCCAAGTGAATTCATCAGGCGTTCCAAAGAGCATATGAGGAAAAAACAGCAACAAAAAAGCTTCTGGAAAAGTTGA 999 0.4234 MSLRFLRSRFFSVASKRFLCTNAAPATPQPSPPSVTSPNRWNFLKYTVIGALTGTTVLTGYASYAYNLDEIDEKTKSFRESTKYTPADGATALDKFQGMLYSTAVTVPAKAVELYLDARRLIEEQVRSYTEPYTDKLLPDLLPQEQHVFTLVVDLNETLIHYIWKRDTGWQTFKRPGVDAFLEHLAQFYEIVVYTDEQNMFVDPVIERLDPKHCIRYRLSRPATKYQDGKHYRDLSKLNRNPAKVMYLSGHALESSLQPENSVPIKPWVHTDKDDTALVDFIPFLEFVARSSPADIRPVLQSYQGLDIPSEFIRRSKEHMRKKQQQKSFWKS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g04019 332 SUPERFAMILY HAD-like 136 301 IPR036412 -
Tsu05g04019 332 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 22 324 - -
Tsu05g04019 332 CDD HAD_FCP1-like 149 265 - -
Tsu05g04019 332 Gene3D - 133 318 IPR023214 -
Tsu05g04019 332 PANTHER OS05G0513200 PROTEIN 22 324 - -
Tsu05g04019 332 SMART forpap2 147 275 IPR004274 -
Tsu05g04019 332 Pfam NLI interacting factor-like phosphatase 150 297 IPR004274 -
Tsu05g04019 332 ProSiteProfiles FCP1 homology domain profile. 144 288 IPR004274 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g04019 Tsu-Chr5 51064441 51068563 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g04019 K17496 - gmx:100803155 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04019 05 51064441 51068563 Tsu05g04019 05 51064441 51068563 ECH