Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03960 atgtcttcaacatcatcatctATCAGAAACCTTCTTCCTAGATCATTTTCTTCCAAACGAAAATCAACTTTATCAAACCCTAAATTCCCAAATTCAGATGCTGAAAACACTCCCCCCACGGATCCCAACATTATTCAGATCAACCATCACCAATCATTACCTATCACAGCAAAACAATCACACTCTGAAACCCAAATTTCAAATCAATCAAATCTCCCTCTTGAATCAGACCCATCAGTGAAAGTTGTAGTACGAATTAGACCTACAAGTAACATTGGAATAGGAGATCAAGTTGTTAATAAAGTTTCCTCTGATACCTTGTGTGTTGGAGATAgacaatttaaatttgattcaatATTTGACTCCAAAACAAGCCAGGAAGATATTTTTCAATCGGTCGGTGTTCCTTTGGTTAGAAATGCTTTAGCTGGTTACAACACTTCAATTCTGTCATATGGGCAGTCTGGAAGTGGAAAGACTTATACAATGTGGGGTCCCCCGAGTGCCATGTTTGAGGAGCACTCGCCGCAAAGTCACAAAGGAATTGTACCTCGGATCTTCCAAATGTTGTTTTCTGAGCTTGAAAAAGAGCAGCGCATGTCTGAAGGAAAACAGTTCAACTATCAGTGTCGATGTTGTTTTCTTGAGATATACAATGAACAAGTTGGGGATTTACTTGATCCAACCCAGCGGAACCTTGAGATGAAGGATGACTCCAAAAATTCATTGTCCTTAGAGAATTTGAGTGAGGAATATGTTACTAGCTATGATGATGTGACTCAAATTCTGATTAAGGGCCTCTCTAGCAGAAAAGTTGGAGCAACAACCTTAAATTCTAAGAGCTCTAGATCACACATAATTTTCACTTTAGTGATCGAGTCTTGGTGCAAGGGAACTTCAACAAATGGTTTCAGTAGTTCAAAAAGTAGCAGAATTAGCCTTATTGATCTTGCTGGTCAGGACAGGAACAAAGTTGACGGCGCAGGCAGACAATGTCTAAGGGAAACCAAATGTGTAAAGAAGTCTTTATCTCAGCTTGGACACTTAGTAGATGCTTTAACTAAAGAAAGTTGCTCAGGAAAAGCTGAAGTTCCAAACAGAAACTCCTGTTTAACACGTTTACTACATGAGTCACTCGGTGGAAATGCCAAACTCTCAGTAATCTGTTCCATCTACCCGGATATCAAGAATAATGGTGAAACACTGCGCACACTCAGATTTGGACAACGAGTACGATCTATTCGAAATGAGCCTGTTATCAATGAAATAAAGGAGGATGATGTTAACGATTTAAGTGATCAAATCCGACAGCTGAAGGAAGAACTTATTAGAGCAAAGGCTGATGTTCGTAGCTCAGATGGGAATAAAAAAGGATATATCCATGTACAGAATGTACGGGAAAGCCTGAATAATTTGAGGGTCAGCTTAAACCGTTCTCTACTCATACCTAACATCGATAATGATACCGATGATGAGGTGAATGTGGACGAGGAGGACATAAGGGAATTACGCCAGCAGATTGATGAATTTTATAGTTCATGTGAAGGAAATCCTATAGACATATCTGTCAGTGAAGATTGTGTTCAGTATTATTCTGTTGAGGAAAGTTGCGAGGCAGATATGACCTGTGgtgatgaaattgaaaaaggAGAAGTATGTTCGGGAGAAGCATTTTACAAGCTTTGTCGTGAAGACAGTGTGGCATCAGATAACACCTTGTACGCCTCAGCCAACGACACCTCAAGGGCCATTAGATCTTCATTCAGAGATAGCATTTCAGTCAGCTCATCCTGTCGGTCTCCCATGCTTCTTGAGGAACCACAACTTTCTGAGTCTCCAAAAATCAGAAATATACAGAGGAAGAGTGTGGCCTTTTCATCTTGTCTTGGAAGTTCAAATAAAGTGgaagaagaaaattcaaattCCAATAAGGAATTGTTGGGTAAGTCATTTACAAAGGATGACGTTATGCGATCCTCACTGAGATCAAGCAAGGTTTTTCCTGGTCCTACCGAGTCATTGGCAGCAAGCCTTAAGAGGGGATTACAGATAATCGATTCTCATCAACGGAATTCATCATTGAACAAATCATCAACTTCCTTCTCTTTTGGGCGCTTAAGCTTCGGTGGTTCTTGTGATCAAACAATGCAGCAGAAGAAATATTCTATTGATGAAAGAACTGCCACATTGCTTTGTGGTTATTGCCGTAAAATAATAACTGATCAGGAGGACTCCAGAGAGGTCCGAGATAGTTTAAAGCCATGCATTGATACAGCTGAAGCAAAAAATTCGGATGGACTGACAGATAAGGCTCCAAAAgATTTGGAGAGTATAATGGAAAAAGAAATCACGAGAGGAAAGGAACTCGAGAATATTTGCAAGGAGCAAGCAGCTAGAATTGATGAACTGAATCAAATGGTGGAGAAACTTAAAGGAGAAAAAGAAGTGAACTCCATCATTGTGTATCAAGAAAGCAACAAGCAGACTGAACATGCAGAAGAGGACAATAACTCGATGAAAGATGAATACAAGCTCTTGAAAGGAACATCATCAGATAGtcatttagaagaaaaatgtgaaattaaaGAAGTCCGTGAAGAATTAACTCAAAGAAGCATCTCTTTTGATGCTACTGAGAAGGAAGAACTTCTCAAGGAAATTCAGAATCTGAGAAGCAAGCTGCAGTTATACAGCGATGCACCAGTTAAAATGTCTACTGACAAACTGAGATCTTCGTTAATATCAAGATCCATTCAATTGCGTAAAAGTGGTGTGTTTTCTCCTAATAATAATAGTGCGGAAGAGCTAGAGAAAGAAAGGGAGAGATGGACAGAAATGGAAAGTGAGTGGATTTGTCTCACGGATGAACTAAGAGTTGATCTTGTGGCTAACCGGCAGCGGGCAGAGAGGGTGGAGCAGGAATTGAGGTTAGAGAAGATGTGCACTGAGGAGTTAGATGATGCACTCAAAAGATCAGTTCTCGGACATGCTAGGATGGTAGAACACTATGTTGAACTCCAAGAAAAGTATAATGATTTGGTTGCAAAACACACTGCTATAATGCATGGCATAGCTGAGGTGAAGAAGGCAGCAGCTAAGGCCGGGAAAAGGGGTCATGCCCGCTTTGCCAAATCTCTTGCCGCCGAGCTTTCTGCATTGAGGGTAGAGAGGGAAAGGGAAGCAAAATTCTTGAAGAAGGAGAACACAAGTCTCAAAGCTCAACTTAGAGACACTGCAGAAGCTGTTCATGCTGCTGGAGAATTACTTGTCAGACTCAGAGAAGCCGAACATGCAGCTTCTGTTGCAGCGGATAATTTTACAAAAGTGCAACAGGATaatgaaaaacttaaaaagcAAATGGATAAGCTCAAAAGAAAGCACAAGATGGAGTTGATTACCATGAAGCAGTACCTTGCAGAGAGCAAATTACCAGAGTCGGCACTGAAACCGCTATACCGAGAGGATTCCGATGTGGCACACAACAATGCTGCAAGTCCTCGCTATCAGGATGATGATCAGTCATGGAGAGCTGAATTTGGAGCAATCTATCAAGAGCATATTTGA 3564 0.3965 MSSTSSSIRNLLPRSFSSKRKSTLSNPKFPNSDAENTPPTDPNIIQINHHQSLPITAKQSHSETQISNQSNLPLESDPSVKVVVRIRPTSNIGIGDQVVNKVSSDTLCVGDRQFKFDSIFDSKTSQEDIFQSVGVPLVRNALAGYNTSILSYGQSGSGKTYTMWGPPSAMFEEHSPQSHKGIVPRIFQMLFSELEKEQRMSEGKQFNYQCRCCFLEIYNEQVGDLLDPTQRNLEMKDDSKNSLSLENLSEEYVTSYDDVTQILIKGLSSRKVGATTLNSKSSRSHIIFTLVIESWCKGTSTNGFSSSKSSRISLIDLAGQDRNKVDGAGRQCLRETKCVKKSLSQLGHLVDALTKESCSGKAEVPNRNSCLTRLLHESLGGNAKLSVICSIYPDIKNNGETLRTLRFGQRVRSIRNEPVINEIKEDDVNDLSDQIRQLKEELIRAKADVRSSDGNKKGYIHVQNVRESLNNLRVSLNRSLLIPNIDNDTDDEVNVDEEDIRELRQQIDEFYSSCEGNPIDISVSEDCVQYYSVEESCEADMTCGDEIEKGEVCSGEAFYKLCREDSVASDNTLYASANDTSRAIRSSFRDSISVSSSCRSPMLLEEPQLSESPKIRNIQRKSVAFSSCLGSSNKVEEENSNSNKELLGKSFTKDDVMRSSLRSSKVFPGPTESLAASLKRGLQIIDSHQRNSSLNKSSTSFSFGRLSFGGSCDQTMQQKKYSIDERTATLLCGYCRKIITDQEDSREVRDSLKPCIDTAEAKNSDGLTDKAPKDLESIMEKEITRGKELENICKEQAARIDELNQMVEKLKGEKEVNSIIVYQESNKQTEHAEEDNNSMKDEYKLLKGTSSDSHLEEKCEIKEVREELTQRSISFDATEKEELLKEIQNLRSKLQLYSDAPVKMSTDKLRSSLISRSIQLRKSGVFSPNNNSAEELEKERERWTEMESEWICLTDELRVDLVANRQRAERVEQELRLEKMCTEELDDALKRSVLGHARMVEHYVELQEKYNDLVAKHTAIMHGIAEVKKAAAKAGKRGHARFAKSLAAELSALRVEREREAKFLKKENTSLKAQLRDTAEAVHAAGELLVRLREAEHAASVAADNFTKVQQDNEKLKKQMDKLKRKHKMELITMKQYLAESKLPESALKPLYREDSDVAHNNAASPRYQDDDQSWRAEFGAIYQEHI 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03960 1187 Coils Coil 1106 1133 - -
Tsu05g03960 1187 Coils Coil 873 900 - -
Tsu05g03960 1187 Pfam Kinesin motor domain 100 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g03960 1187 Coils Coil 421 455 - -
Tsu05g03960 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 446 IPR027417 -
Tsu05g03960 1187 PANTHER KINESIN-LIKE PROTEIN KIN-12F 57 1187 - -
Tsu05g03960 1187 MobiDBLite consensus disorder prediction 1 45 - -
Tsu05g03960 1187 Coils Coil 1047 1081 - -
Tsu05g03960 1187 ProSiteProfiles Kinesin motor domain profile. 79 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g03960 1187 Gene3D Kinesin motor domain 75 456 IPR036961 -
Tsu05g03960 1187 Coils Coil 786 813 - -
Tsu05g03960 1187 MobiDBLite consensus disorder prediction 55 74 - -
Tsu05g03960 1187 SMART kinesin_4 77 422 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g03960 1187 Coils Coil 822 842 - -
Tsu05g03960 1187 PANTHER CENTROMERE PROTEIN E 57 1187 - -
Tsu05g03960 1187 PRINTS Kinesin heavy chain signature 144 165 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g03960 1187 PRINTS Kinesin heavy chain signature 275 292 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g03960 1187 PRINTS Kinesin heavy chain signature 311 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g03960 1187 PRINTS Kinesin heavy chain signature 364 385 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03960 Tsu-Chr5 50564860 50570497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03960 73 450 Miscellaneous Gene Families AT5G06670 33.420 1.03e-53 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03960 K10400 - gmx:100806960 1660.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03960 05 50564860 50570497 Tsu05g03960 05 50564860 50570497 ECH
Tsu03g01137 03 10722007 10728998 Tsu05g03960 05 50564860 50570497 PCT