Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03924 ATGTCCAAAACTTTATTGGGCCCCCAATGGGCTCCATTGCTTGGAATTATTGCAACTTTCTTGGTGTCTGGGCTAATGCATGAGCTGCTATTCTACCATGTCACACGTGTTACTCCCACGTGGGAGGTTACTTGCTTTTTTGTGCTTCATGGGGTGTGCGTGGTTATAGAGGTTGGTTTGATGAAGTGGTTGGGTCATAAGTGGAGAGTCCATTGGGCTATATCTGGGCCCATTACAGTGGCGTTTGTGGTAGCAACCGCCGCATGGCTATTCTTTGCACCGTTGTTGCGTGATGGTGCCGATCAAAGAAGTATCGAGGAGTTAAATAATGTTGTTCATTGTGTCGTAAGAAAGTTTCAAGTGAGGGAGTAA 372 0.4624 MSKTLLGPQWAPLLGIIATFLVSGLMHELLFYHVTRVTPTWEVTCFFVLHGVCVVIEVGLMKWLGHKWRVHWAISGPITVAFVVATAAWLFFAPLLRDGADQRSIEELNNVVHCVVRKFQVRE 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03924 123 Pfam Membrane bound O-acyl transferase family 5 48 IPR032805 -
Tsu05g03924 123 PANTHER (MEMBRANE BOUND O-ACYL TRANSFERASE) FAMILY PROTEIN, PUTATIVE-RELATED 3 119 - -
Tsu05g03924 123 PANTHER LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED 3 119 IPR044851 GO:0006629|GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03924 Tsu-Chr5 50235692 50236063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03924 5 117 Miscellaneous Gene Families AT5G55370 46.087 2.24e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03924 - - gmx:100809798 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03924 05 50235692 50236063 Tsu05g03924 05 50235692 50236063 ECH