Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03911 AtgcatcaattttattttattttgcagcCTGATGACACTTCTGGAACCATCAAGGAACAGCTTGCAGCTATAGCACCTGTACTTGAACAGTTATGGCAACAAAAGGAAGAAAGAATAAAGGACTTCGCAGATGTGCAGTTACAGATCCAAAGAATATGTGGAGAGATAACTGGGACCTCGAACGTTAATGATGTACCTGTGGTTGATGAGTCTGACCTGACTCTAAAGAAGTTTGAGGAATATCAATCTGAGCTTCAAGAACTTCAAAAGGAAAAGAGTGACAGGTTGCAAAAGGTTTTTGAATTTGTGAGTACTGTGCATGATCTATGTGCTGTCCTTGGTATGGACTTCTTCAGTACGGTAACTGAGGTTCATCCAAGCCTGAATGATTCTACTGGTGGTCAATCCAAAAGCATAAGCAATGACACCCTAGCTAGGCTTGCGAACACAGTCTTGACACTGAAAGAAGATAAAAAGCAGAGGCTGCACAAGCTCCAAGAATTAGCTTCTCAGCTAATTGATCTGTGGAATCTAATGGATACTCCTCCAGAGGAAAGGAAACTGTTTGACCATGTTACCTGTAATATCTCAGCTTCTGTTGATGAAGTAACTATTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGGCTGAGGTTGAAGTTGAGAGACTGGACCAGCTTAAAGCAAGCAGGATGAAGGAAATTGCTTTCAAGAAGCAAACAGAACTCGAAGAGATATTTGCCCATGCTCATATAGAAATAGATCCGGAGGCTGCAAGAGAGAAGATTATGGCATTGATTGATTCTGGAGATATTGAACCAACTGAATTACTTGCTGACATGGACAATCAAATAGCAAAAGCAAAAGAAGAAGCTTTAAGCCGAAAAGATATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGCTGGCTTGAGGACTACAATCGGGATGAGAACAGGTATAATGCAAGCAGAGGTGCACACTTAAACCTCAAAAGAGCAGAGAAAGCTCGGATACTGGTAAATAAGATTCCCGCTTTGGTTGATACATTGGTTGCTAAAACACGTGCATGGGAAGAGACTCATGATATGTCATTCACATATGATGGTGTTCCTCTTCTAGCCATGTTAGATGAATATGCCATGCTTAGGCATGAACGGGAAGAAGAAAAACGAAGAATGAGGGACCAGAAGAAATTTCAGGAGCAACAAAGCGCAGAACCGGAAGCCCCCTTTGGTTCAAGACCCAGTCCTGCTAGGCCAGTTAGTGCTAATAAGAAGGTTGGTGGCCCTCGTGCTAATGGAGCCAACGGTACTCCTAACCGACGGCTATCACTTAATGCTCATCAAAATGGAAGCAGGTCCATAGCAAAAGATGGAAAAAGGGATAGCACTAGACTAGTTGCTCCTGTGAATTATGTGGCTATATCAAAAGAAGATGCTGCATCCCACGTATCTGAAGCTTTCTTTTTTCCTCTGCAAGCAAAGGCACAAACAAACGACGACGTTTCTTCCGCATCACTCTCTGAACTTTCTTTCTCAGAATTGGCTATGGCGAACGACAACGAACCCGCGAAGCTTTTGTTACCATACCTTCAACGCGCTGATGAATTACAGAAACACGAACCTCTCGTCGCTTACTACTGTCGATTATATGCGATGGAAAGAGGATTGAAGATTCCACAAAGTGATCGCACTAAGACTACTAATTCTCTTCTTGTTTCTCTCATGAAACAGCTTGAAAAGGATAAGAAGTCAACCCAGGTGGGGCCTGAAGATAATCTATATCTTGAGGGATTTGCTTTGAATGTGTTTGGAAAAGCAGACAAGCAAGATCGTGCTGGAAGAGCTGATTTGAACACAGCAAAAACATTTTACGCTGCTAGCATATTTTTTGAGATTCTTAACCAATTTGGACCTGTTCAGCCTGATCTGGAGCAGAAACAAAAATATGCAGCATGGAAAGCAGCTGATAtaagaaaggctttgaaagaaGGAAGGAAGCCCGTGGCTGGCCCGCCTGCTGGTGATGAGGACCTCTCAGTTCCATTGAGTTCTCCTAGTACTAGATATGATCTTGGGACTACTGAAACCTCTGCTTCTAGTGCTGGATCTGAATCCGATTCGGCACATAGTTATCATAACTCTGTCAACTACCAGAATCTGCCAAGCATTCCTCCTGTACCTAAATTCCATGATACTATCAATGATCAGAATTCTGCAAACATTCCACCATCTTTGCAGTTTCATGATAGGGTAGATGATAATAAGCATTCTTCAACTGCTTCTCCATCGTCTCACTCTTATACACCCGGAGGTTATCCTTCCCAAGACTTCCATCCTCCTCCATCTTCCCAGGATTATCATCATCCACCACCTTCCCATGATTACCATTCTTCTGCACCTTCCCAAGATTATCATCCTCCTCCACCTTCCCACGATTACCATTCTTCTGCACCTTCCCAAGATTACCATCCTCCCCCACCTTCCCAGGATTACCGTCCTCCTCCACCTTCCCAGGATTATCAACCCCCACCACCTTCCCAAGATTATCAACCCCCTCCACCTTCCCAAGATTACCATCATCCTCCACCTGCCAGATCAGACAGTTCTTATTCTGAGCACTACAACCACCAGCAATACTCACCAGATCAATCACAGAATTTAGGTCCAAATTACCCTTCTCATGAAACTCCCGCTCCTTACTCTCTTCCCCATTTTCAATCTTATCCAAGTTTTACAGAAAGCAGCCTACCATCGGTACCAGTAAACCACACTTATTATCAAGGGCCCGATGCTTCATTTTCTTCCCAGTCAGCTCCTCTGACTACAAACCATTCATCAAGTGCCCAAAACAGTTCCAGCAGCAGAAATGGAACTGCCTCAGAACCCAAGCCAACAACTCAATCATACCAGTATGACAGTAGCTATCAGCCAGCACCTGAAAGAATAGCAGAGGCACACAAGGCTGCAAGATTTGCTGTTGGGGCACTGGCATTCGACGATGTCTCGATTGCAGTAGACTACTTGAAGAAATCACTCGAGTTGCTGACAAATCCATCAGTTGGCCAGTAA 3087 0.4334 MHQFYFILQPDDTSGTIKEQLAAIAPVLEQLWQQKEERIKDFADVQLQIQRICGEITGTSNVNDVPVVDESDLTLKKFEEYQSELQELQKEKSDRLQKVFEFVSTVHDLCAVLGMDFFSTVTEVHPSLNDSTGGQSKSISNDTLARLANTVLTLKEDKKQRLHKLQELASQLIDLWNLMDTPPEERKLFDHVTCNISASVDEVTIPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQTELEEIFAHAHIEIDPEAAREKIMALIDSGDIEPTELLADMDNQIAKAKEEALSRKDILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRAWEETHDMSFTYDGVPLLAMLDEYAMLRHEREEEKRRMRDQKKFQEQQSAEPEAPFGSRPSPARPVSANKKVGGPRANGANGTPNRRLSLNAHQNGSRSIAKDGKRDSTRLVAPVNYVAISKEDAASHVSEAFFFPLQAKAQTNDDVSSASLSELSFSELAMANDNEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSDRTKTTNSLLVSLMKQLEKDKKSTQVGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGPVQPDLEQKQKYAAWKAADIRKALKEGRKPVAGPPAGDEDLSVPLSSPSTRYDLGTTETSASSAGSESDSAHSYHNSVNYQNLPSIPPVPKFHDTINDQNSANIPPSLQFHDRVDDNKHSSTASPSSHSYTPGGYPSQDFHPPPSSQDYHHPPPSHDYHSSAPSQDYHPPPPSHDYHSSAPSQDYHPPPPSQDYRPPPPSQDYQPPPPSQDYQPPPPSQDYHHPPPARSDSSYSEHYNHQQYSPDQSQNLGPNYPSHETPAPYSLPHFQSYPSFTESSLPSVPVNHTYYQGPDASFSSQSAPLTTNHSSSAQNSSSSRNGTASEPKPTTQSYQYDSSYQPAPERIAEAHKAARFAVGALAFDDVSIAVDYLKKSLELLTNPSVGQ 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03911 1028 MobiDBLite consensus disorder prediction 392 466 - -
Tsu05g03911 1028 MobiDBLite consensus disorder prediction 442 458 - -
Tsu05g03911 1028 MobiDBLite consensus disorder prediction 392 407 - -
Tsu05g03911 1028 Coils Coil 214 234 - -
Tsu05g03911 1028 Coils Coil 377 408 - -
Tsu05g03911 1028 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 492 IPR007145 GO:0000226|GO:0008017
Tsu05g03911 1028 Pfam Vta1 C-terminal domain 985 1022 IPR041212 -
Tsu05g03911 1028 Coils Coil 155 175 - -
Tsu05g03911 1028 Coils Coil 71 98 - -
Tsu05g03911 1028 Gene3D - 522 673 IPR023175 -
Tsu05g03911 1028 MobiDBLite consensus disorder prediction 669 986 - -
Tsu05g03911 1028 MobiDBLite consensus disorder prediction 826 866 - -
Tsu05g03911 1028 MobiDBLite consensus disorder prediction 686 727 - -
Tsu05g03911 1028 Pfam Microtubule associated protein (MAP65/ASE1 family) 13 423 - -
Tsu05g03911 1028 MobiDBLite consensus disorder prediction 763 787 - -
Tsu05g03911 1028 Gene3D Immunoglobulin FC, subunit C 984 1023 - -
Tsu05g03911 1028 MobiDBLite consensus disorder prediction 909 981 - -
Tsu05g03911 1028 Pfam Vta1 like 534 669 IPR039431 -
Tsu05g03911 1028 Gene3D - 284 418 - -
Tsu05g03911 1028 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 1 11 492 - -
Tsu05g03911 1028 MobiDBLite consensus disorder prediction 874 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03911 Tsu-Chr5 50118806 50129955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03911 9 431 EF-hand Containing Proteins AT5G62250 45.958 6.38e-113 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03911 K16732 - gmx:100806071 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03911 05 50118806 50129955 Tsu05g03911 05 50118806 50129955 ECH