Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03910 ATGAGAGATTCAAATTCGGATCATAGTTGTAGTTCACCAAGAACGCCAAATCTTCGCCAAAGAAGACGTTCAAATGAGATTCCTCCTGAAATACTCAAATCAAACGGAACCATTTTACTCGCAAATGATAAATTCAAATACAAATCGATGTGGATTCGCGCATATTCATCTCTATGGATGCTAGCATTTGTCTCACTTATTATATACATGGGCCATCTTTACATTTGGGCCATGATTGTTGTTATCCAAATATTCATGGCTAGTGAGCTCTTCAATCTATTGAGAAGAGCTAATCAAGATAAACGTCTCCCTAAGTTTAAGCTCTTGAATTGGCATTTTTTCTTCACGGCGATGCTATATGTTTACGGTCGTATTCTCAGTCAACACCTTGTGAATACAGTGACATCGGATAAAATTTTCTATAGACTCGTCAGCAACCTCATCAAGTATCAGATGGTTATATGTTACTTCCTATATATTGCAGGTTTCGTATGGTTTATTCTTTCGTTAAAGAAGAGATACTACAAATATCAATTTGGCCAGTATGCATGGACACATATGATACTTATTGTTGTGTTTACGCAATCTGCATTCACGGTAGCTAATATATTTCAAGGAATTTTCTGGTTTCTTTTCCCTGCATCCCTTATTGCTATGAATGATGTTGCTGCGTATTTCTTCGGTTTCTTCTTTGGAAAAACACCATTGATCAAGTTATCTCCAAAGAAAACATGGGAAGGTTTTATTGGAGCATCTGTTGCAACTATGATCGCTGCATTTACGTTCGCAAATTTTCTAGGTTGCTTTCAGTGGCTAACATGTCCGAGGAAGGATTTATCAACAGGTTGGCTTGAGTGTGACCCTGACCCCATTTTTAAGCCAGAGTACATTCCAATGCCAGAATTTGTTTCACATTGGATACCTCAGAAAGAGATAGCAGTTTTGCCAGTACAATGGCACGCCTTGTGGCTAGGACTATTTGCGTCCATCATAGCACCATTCGGAGGTTTTTTTGCTAGCGGTTTCAAAAGAGCTTTTAAAATCAAGGACTTTGGTGACAGTATACCTGGACATGGTGGATTCACTGACAGAATGGACTGCCAGATGGTGATGGCTGTTTTTGTTTACATTTACCATCAGTCATTTGTTGTCCAACATGACTATTCCATTGATGTGCTTTTGGACCAGATAATGCGGGATCTTGGTTTTGAGGAGCAGCTAGCTCTTTACACAAAACTTGGGCAGATATTACACGAAAGGCAATTAATGCATATATGA 1278 0.3873 MRDSNSDHSCSSPRTPNLRQRRRSNEIPPEILKSNGTILLANDKFKYKSMWIRAYSSLWMLAFVSLIIYMGHLYIWAMIVVIQIFMASELFNLLRRANQDKRLPKFKLLNWHFFFTAMLYVYGRILSQHLVNTVTSDKIFYRLVSNLIKYQMVICYFLYIAGFVWFILSLKKRYYKYQFGQYAWTHMILIVVFTQSAFTVANIFQGIFWFLFPASLIAMNDVAAYFFGFFFGKTPLIKLSPKKTWEGFIGASVATMIAAFTFANFLGCFQWLTCPRKDLSTGWLECDPDPIFKPEYIPMPEFVSHWIPQKEIAVLPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFVYIYHQSFVVQHDYSIDVLLDQIMRDLGFEEQLALYTKLGQILHERQLMHI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03910 425 MobiDBLite consensus disorder prediction 1 24 - -
Tsu05g03910 425 ProSitePatterns Phosphatidate cytidylyltransferase signature. 340 366 IPR000374 GO:0016020|GO:0016772
Tsu05g03910 425 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 3 6 423 - -
Tsu05g03910 425 Pfam Cytidylyltransferase family 52 382 - -
Tsu05g03910 425 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 6 423 IPR016720 GO:0004605
Tsu05g03910 425 PIRSF CDP-DAG_synth_e 2 424 IPR016720 GO:0004605
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03910 Tsu-Chr5 50110609 50113116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03910 2 420 Lipid Metabolism Gene Families AT4G26770 74.171 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03910 K00981 - gmx:100805363 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03910 05 50110609 50113116 Tsu05g03910 05 50110609 50113116 ECH