Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03909 ATGGAACTCTGTACTCGTACCTTCAAAACTTCTCTCTTTTTCAAcccttctttctctctttcttcttcaaattctcATCTTCTTCGTTTCAATACTACTCTTAAACCCTTCAAATTCAGTTCCATCAATCTCTCATCTTTCATTCAACCTTCTATTTATCATCACACTTCTTCTTCTCCATTCACtatctcagcttcttcttcttcatcatcagttgAACTTTACTCAGAAAATGATCGTCTTCCAGCTAAATTGAAGGTTTCTGAAACACCGGAATCCAATTCCAGAGTTAGATTGCATGTGGAGGTGCCACCACTGGTATGCGAGGACTGTTACCAAAGGGTCCTAGTTGAGTTTACGAAGCATGCAAAGATACCTGGTTTTCGTCCTGGAAAAACGGTCCCAGAAAGTATTCTTCTTGGTTATGTGGGGATTCAAAATGTTCAAAAGGCTGTGATTGAAGCAATATTGAGGAGGACACTTTCACACGCTGTGACAACGgttACTGGAAGGGCTTTGCAGGACTCCGTACGTATAGTTACTAAATTTTCTGAGATGGAGGAGACATATTCTTCTCACGGACTTCTTAGATATGAAGTCATTGTTGATGTTGCGCCAGAAATCAAATGGATTTCTGATGATGCATACAAAAATTTGAAGGTTGTTGTTGAGATAGACAGTGAAATAGATGCTCACATAGCATCTGAAAAAGAATTTAGAAGGCGGTACAAGTCTGCCGGTGTACTGAAAGTTGTTACTGATAGAGGACTACAGGTTGGTGATGTGGTTGTACTTGACATCTCAGCAACAACCATCGATCAAGATGAATCAAATGTTAAAAGCATTCCTTCTGCCGAAAGTAAAGGATTTAATTTTGACACGGACGATAGTGAAATATTAGTACCAGGTTTCCTTGATTCTATAATTGGAATTGGTCGAGGTGAAACAAAGTCATTCCCCATTGTTTTTCCGGAAACTTGGAAACAGGAAAATCTCTGTGGTGTTCATGCTCAGTTTACTGTTGAGTGCAAAGAACTTTTTTACAGAGATTTACCTGAGCTGGATGATTCTATTGCTGATAAGCTCATCCCTGGATGCACCACAGTGGAAGAGGTCAAAGAGTTATTGTTACAGAGATTCCAAGAGATAGAGCAAACAGCTAGGGAACAAGCAACTGATAATGCTATTTTAGATCATGTTTCTAAGCTGGTAGAAGTTGACATACCTCAATCCTTGTTTGAGGAACAAGGTAGACAGCTTTATGGATCCAGCCTATTAGAAATGCAGacaaaaataaaactaaatgaGCAGCAGCTAGCTACTTTATCAAGTCCAAAGGCCGTGAATGAATATCTTGAGCATCATagggaaaatataaaaaatttaatcaaacagAACCTGGCAGTTGGTGACATATATAGGCGTGAAAATCTGCAGCTTCCTACCGAAGACATCGTCCAAGAGGTTGAGAATTCCATCGCTGAATTCAAACGTCAAAAACAAGAGTATGATGAGGAACGTGTAAAAGAACAGGTTCAAGAAATACTAGAAGGAGCTAAGGTGCTTGAATGGTTGAAAGAACATGCAGATATTCAGTATATAACAAGATGA 1611 0.3687 MELCTRTFKTSLFFNPSFSLSSSNSHLLRFNTTLKPFKFSSINLSSFIQPSIYHHTSSSPFTISASSSSSSVELYSENDRLPAKLKVSETPESNSRVRLHVEVPPLVCEDCYQRVLVEFTKHAKIPGFRPGKTVPESILLGYVGIQNVQKAVIEAILRRTLSHAVTTVTGRALQDSVRIVTKFSEMEETYSSHGLLRYEVIVDVAPEIKWISDDAYKNLKVVVEIDSEIDAHIASEKEFRRRYKSAGVLKVVTDRGLQVGDVVVLDISATTIDQDESNVKSIPSAESKGFNFDTDDSEILVPGFLDSIIGIGRGETKSFPIVFPETWKQENLCGVHAQFTVECKELFYRDLPELDDSIADKLIPGCTTVEEVKELLLQRFQEIEQTAREQATDNAILDHVSKLVEVDIPQSLFEEQGRQLYGSSLLEMQTKIKLNEQQLATLSSPKAVNEYLEHHRENIKNLIKQNLAVGDIYRRENLQLPTEDIVQEVENSIAEFKRQKQEYDEERVKEQVQEILEGAKVLEWLKEHADIQYITR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03909 536 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 69 535 IPR005215 GO:0015031
Tsu05g03909 536 Gene3D - 215 531 IPR037041 GO:0006457|GO:0015031
Tsu05g03909 536 Hamap Trigger factor [tig]. 85 532 IPR005215 GO:0015031
Tsu05g03909 536 PANTHER TRIGGER FACTOR-LIKE PROTEIN TIG, CHLOROPLASTIC 69 535 - -
Tsu05g03909 536 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 354 532 IPR027304 -
Tsu05g03909 536 Pfam Bacterial trigger factor protein (TF) 87 230 IPR008881 GO:0006457|GO:0015031
Tsu05g03909 536 Gene3D - 83 208 IPR036611 GO:0006457|GO:0015031
Tsu05g03909 536 Coils Coil 486 513 - -
Tsu05g03909 536 Gene3D - 245 352 IPR046357 GO:0003755
Tsu05g03909 536 SUPERFAMILY Trigger factor ribosome-binding domain 86 218 IPR036611 GO:0006457|GO:0015031
Tsu05g03909 536 SUPERFAMILY FKBP-like 249 355 - -
Tsu05g03909 536 Pfam Bacterial trigger factor protein (TF) C-terminus 368 527 IPR008880 GO:0006457|GO:0015031
Tsu05g03909 536 TIGRFAM tig: trigger factor 96 525 IPR005215 GO:0015031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03909 K03545 - gmx:100812597 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03909 05 50105106 50110746 Tsu05g03909 05 50105106 50110746 ECH