Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03856 ATGGTGTCGTTGTGTGATGTCACCACCTGCTTCCAGATTCCGGCGATAAACGGCGCCGGCATACTCCGCAACCACACTCCATTGACCACCAGAAGTGGGTGTCTGTCAGTTACCGGCGGTACCTCCTTCTGCAACACCCTTTCCTCATCGAAACTCTCTTCATCATTCAAATGCTTGAGCATTTCTTCTAATGCCCGAATAGGAATTAAGGAAGCTGTTGAAACAGAAAAAGCTCCTGCAGCTTTGGGACCATATTCTCAAGCAAACAAAGTCAACAATATTCTTTTTGTCTCTGGTGTTCTTGGACTTGTTCCTGAGACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAAACAGAACAGCTTCTTAAGAACATGGGTGAAATCCTCAAAGCCGGTGGTGCCAGCTACTCATCGGTTGTAAAGACAACAATTATGTTGGCTGACTTGAAGGACTTTAAGAAAGTCAATGAGATTTATGCTAAATATTTCCCTTCACCTTTCCCAGCTCGTTCAACTTATCAAGTAGCTGCCTTGCCATTGGACGCCAAGATTGAAATCGAGTGCATTGCAACACTATAA 582 0.4416 MVSLCDVTTCFQIPAINGAGILRNHTPLTTRSGCLSVTGGTSFCNTLSSSKLSSSFKCLSISSNARIGIKEAVETEKAPAALGPYSQANKVNNILFVSGVLGLVPETGKFISDNVEDQTEQLLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPFPARSTYQVAALPLDAKIEIECIATL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03856 193 Gene3D - 68 193 IPR035959 -
Tsu05g03856 193 ProSitePatterns Uncharacterized protein family UPF0076 signature. 169 187 IPR019897 -
Tsu05g03856 193 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 1 193 IPR006175 -
Tsu05g03856 193 CDD YjgF_YER057c_UK114_family 85 191 - -
Tsu05g03856 193 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 70 192 IPR006056 -
Tsu05g03856 193 Pfam Endoribonuclease L-PSP 76 192 IPR006175 -
Tsu05g03856 193 PANTHER PERCHLORIC ACID SOLUBLE TRANSLATION INHIBITOR-LIKE PROTEIN 1 193 - -
Tsu05g03856 193 SUPERFAMILY YjgF-like 71 193 IPR035959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03856 Tsu-Chr5 49643996 49646486 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03856 K09022 - gmx:100500302 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03856 05 49643996 49646486 Tsu05g03856 05 49643996 49646486 ECH