Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03853 ATGATGAATTGTTCAACCAAATTCCAATATCCGCCACTCGGCATTTCATCTAAAAACCTAATTCCTCATCACGATTCAGATCTTCAACCGTTAAAACAATTTCAACGTAGAAAACCTAAAACTCCGAGAACTCGTTTGAAGAAATATGGAACTTCTGGTGGTGGTGGTAAACGGAGTAGACCTGAAACTCCGTTATTGAAATGGAAGATCCATGATAAAATTGAGGATCTTGTTGATGAAGAGAAGAAATTATCGTCGCCGGCGAAGGTTAGTCGGAGAATAAGCCGGaatgtgaagaagaagaagcagatGGAAGTTACTGTTTCTGTACGGAGACTTGCTGCTGGTCTTTGGCGGTTGCATCAGCCGGAGATGGTGGTTGATGATAGCCAGAGGCGGTTTCAGAATGGAAGTCCCCACGTAGGTCTCCCGTTCCTTGGTCGTCCAAATGGTATGACTCATGATACTGATCTGAAGAATCAATCTCAGAGTCCTCGTTCTGTCTTTGGGACAAAAAGTGGACACAATTGTGAGCTCAAACCTTTCCAGTTGCTCAATACTGAAATGGAGGGTGCAACTAAGTGGGATCCTGTATGTCTAAAAACATCAGATGAGGCACAGCATATATATGCGAAACTTGTCAACCAAAAGGTAAGTACTGTATCTGCTGTATCTGCTCTTGAAGCTGAACTAGAGCAGGCACATGCACGTATTCAGGAGCTTGAGACTGAACACCACTCCTCCAAAAAGAAACTTGatcattttttgaagaaaattgggGAGGAAAAAGCCCAATGGCGAAGCAGAGAGCATGAGAAAATTCGTCTATACATTGACGATATTAAAACAGAGTTGAATCGAGAAAGGAAAAGTCGCCAGAGGATTGAAGTTGTCAATTCGAGATTGGTAAATGAGTTGGCAGATGTGAAACTATCAGCAAAACGCTACATGCAGGATTATGATAAGGAGAGGAAGGGAAGAGAACTGATTGAGGAAGTGTGCGATGAGCTTGCTAAGGAAATTGGAGAGGACAAGGCTGAAGTTGAAGCATTGAAGAGGGAATCTATGAAACTTAGGGAAGAACTGGAAGAGGAGAGAAAAATGTTACAGATGGCTGAAGTATGGCGTGAAGAACGTGTTCAAATGAAGTTGATAGATGCAAAAGTTGCTCTTGAAGAAAAATATTCACAGATGAATAAACTTGTTGCAGATTTAGAAACTTTTCTCCAGTCAAAAAATGTGAATCTAAACACAAAGGAGATGAAAGAAGCACAGTCACTTCAACAGGCTGCAGCTGCAATGAACATTGAAGACGTTAAGGGATTTTCATACGAACCCCCCAAGTCAGATGATATCTATGCCATTTTTGAAGATTTAAATTTTGGTGAGCACAACGACAGGGAGATTGAACCGTGCGTTTCTCACAGTCCTCCTAGTCATGCCTCCAAGATTCACACAGTGAGTCCCGAAGCAAATGTAATGAGAAAGGATGGCATTCCAAGGCATTCTGATGTATATATGGATGATAATGGTGATATAGATGGTGATGAAAGCGGATGGGAAACTGTGAGCCATGCTGAGGATCAAGGCTCAAGTTATTCTCCCGAGGAGAGTGTCCAATCTTTAAACAAGAACCATCGAGAGAGTAATGTTTCACGGAGAAGTGTACTTGAATGGGAAGAAAATGCAGGTGAGGAGATACCAATAACAGAAATTAATGAAGTGTGCTCTATACCAACTAAGCAATCAAAAAAGGCCTCATCCATTACAAGACTTTGGAAGTCAGGCATGAACAATGAAGATAATTACAAGATAATCTCTGTGGAGGGAGTGAATGGTAAACTTTCAAATGGTAGGTTATCCAACGGGAGCATCGTGTCTCCTGACCGTGGACCAGGTAAAGGGGGATTGAGCCCTCATGACCTTCAATACCAGTTTAGTCCCTCTGAGTCCACAAGTCCACAAACACAACGAGGTATGAAAGGATGCATTCCTCGCGGTGCTCAGAAGCATAGCTTGAAAGCTAAACTTTTGGAGGCCAGAATGGAGAGCCAGAAGGTTCAGTTGCGCCATGTTCTTAAACAAAAGATTTAG 2094 0.415 MMNCSTKFQYPPLGISSKNLIPHHDSDLQPLKQFQRRKPKTPRTRLKKYGTSGGGGKRSRPETPLLKWKIHDKIEDLVDEEKKLSSPAKVSRRISRNVKKKKQMEVTVSVRRLAAGLWRLHQPEMVVDDSQRRFQNGSPHVGLPFLGRPNGMTHDTDLKNQSQSPRSVFGTKSGHNCELKPFQLLNTEMEGATKWDPVCLKTSDEAQHIYAKLVNQKVSTVSAVSALEAELEQAHARIQELETEHHSSKKKLDHFLKKIGEEKAQWRSREHEKIRLYIDDIKTELNRERKSRQRIEVVNSRLVNELADVKLSAKRYMQDYDKERKGRELIEEVCDELAKEIGEDKAEVEALKRESMKLREELEEERKMLQMAEVWREERVQMKLIDAKVALEEKYSQMNKLVADLETFLQSKNVNLNTKEMKEAQSLQQAAAAMNIEDVKGFSYEPPKSDDIYAIFEDLNFGEHNDREIEPCVSHSPPSHASKIHTVSPEANVMRKDGIPRHSDVYMDDNGDIDGDESGWETVSHAEDQGSSYSPEESVQSLNKNHRESNVSRRSVLEWEENAGEEIPITEINEVCSIPTKQSKKASSITRLWKSGMNNEDNYKIISVEGVNGKLSNGRLSNGSIVSPDRGPGKGGLSPHDLQYQFSPSESTSPQTQRGMKGCIPRGAQKHSLKAKLLEARMESQKVQLRHVLKQKI 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03853 697 PANTHER ACTIN CYTOSKELETON-REGULATORY COMPLEX PAN-LIKE PROTEIN 27 697 - -
Tsu05g03853 697 MobiDBLite consensus disorder prediction 617 664 - -
Tsu05g03853 697 Coils Coil 224 258 - -
Tsu05g03853 697 MobiDBLite consensus disorder prediction 524 540 - -
Tsu05g03853 697 Coils Coil 334 372 - -
Tsu05g03853 697 MobiDBLite consensus disorder prediction 642 659 - -
Tsu05g03853 697 MobiDBLite consensus disorder prediction 511 549 - -
Tsu05g03853 697 PANTHER GB|AAF24581.1 27 697 IPR043424 -
Tsu05g03853 697 MobiDBLite consensus disorder prediction 35 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03853 Tsu-Chr5 49613641 49618010 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03853 - - gmx:100799140 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03853 05 49613641 49618010 Tsu05g03853 05 49613641 49618010 ECH