Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03830 atggaACATCTCAAATTcattcttattcttcttctaaTGTTTCTTTCTTCAACCATCACTTCTGAATATGTTCGTCCTTTGCCTCGAAAAACCTTAAACACCGTGACATGGCCATGGGATTCCAAAACTCACTCTTATGAACCTCAACAGgTACACATATCTTTGGCAGGAGACAAGCACATGAGAATTACATGGATAACTGATGACAAACATTCACCTTCATTTGTAGAATATGGAACATTACCTGGTAGATATGATTCAATATCTGAAGGAGAATACACCTCTTATAGTTATCTGTTATATAGTTCAGGAAAGATACACCATACTGTAATTGGACCATTGGAATACAATACCGTGTACTTTTACCGATGTGGCGGACAAGGTCCTGAGTTCGAGCTCAAAACTCCTCCAGCTCAATTTCCAATTACTTTTGCTGTGGCTGGAGATCTTGGTCAAACTGGTTGGACTAAATCAACGTTAGATCACATTGATCGGTGCAAATATGATGTTTACCTTCTTCCAGGTGACCTTTCGTATGCTGATTGTATGCAACATCTTTGGGACTCGTTTGGTAGGTTAGTTGAGCCGCTTGCTAGTGCAAGGCCGTGGATGGTAACACAAGGAAATCATGAAGAGGAGAATATACTATTGTTAACCGATGAGTTTGTGTCCTATAACTCTAGATGGAAAATGCCTTTTAAGGAGAGTGGATCAACTTCAAATCTTTATTATTCTTTTGAAGTTGCAGGTGTTCATGTTATCATGCTAGGGTCTTATGCAGATTATGACAAGTACTCAGAACAATATAGATGGCTAAAGGAAGATCTCTCAAAGGTGGACAGGAAAAGGACACCTtggttgtttgtgttgtttcaTGTTCCATGGTATAATAGTAACAAAGCTCATCAAGGTGCAGGGGATGATATGATGGCAGTCATGGAACCATTGCTTTATGATGCTAGTGTTGACTTAGTTCTCGCTGGTCATGTTCATGCTTACGAACGTTCGAAACGCGTGTATAATGGAAGATTGGATCCTTGTGGTGCTGTTCATATAACTATTGGTGATGGTGGAAACAGAGAAGGCTTAGCTCATAGGTACATAAATCCACAGCCACAGTGGTCAGAATTCCGCGAAGCCAGTTTTGGTCATGGTGAACTGAAGATTGTAAACTCTACTCATGCCTTCTGGAGTTGGCATAGGAATGATAACGATGAATCAGTAAAAGCTGATGATATCTGGATAACCTCTTTGGTAAGTTCGGGATGTGTTGATCAGAACAGACACGAGCTCAGGAGTATGCTTGCGACACCCTAA 1317 0.3933 MEHLKFILILLLMFLSSTITSEYVRPLPRKTLNTVTWPWDSKTHSYEPQQVHISLAGDKHMRITWITDDKHSPSFVEYGTLPGRYDSISEGEYTSYSYLLYSSGKIHHTVIGPLEYNTVYFYRCGGQGPEFELKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDRCKYDVYLLPGDLSYADCMQHLWDSFGRLVEPLASARPWMVTQGNHEEENILLLTDEFVSYNSRWKMPFKESGSTSNLYYSFEVAGVHVIMLGSYADYDKYSEQYRWLKEDLSKVDRKRTPWLFVLFHVPWYNSNKAHQGAGDDMMAVMEPLLYDASVDLVLAGHVHAYERSKRVYNGRLDPCGAVHITIGDGGNREGLAHRYINPQPQWSEFREASFGHGELKIVNSTHAFWSWHRNDNDESVKADDIWITSLVSSGCVDQNRHELRSMLATP 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03830 438 PANTHER PURPLE ACID PHOSPHATASE 7 428 - -
Tsu05g03830 438 Pfam Calcineurin-like phosphoesterase 143 333 IPR004843 GO:0016787
Tsu05g03830 438 Gene3D - 47 138 - -
Tsu05g03830 438 Pfam Iron/zinc purple acid phosphatase-like protein C 349 407 IPR025733 -
Tsu05g03830 438 Pfam Purple acid Phosphatase, N-terminal domain 48 128 IPR015914 GO:0003993|GO:0046872
Tsu05g03830 438 PANTHER ACID PHOSPHATASE RELATED 7 428 IPR039331 GO:0003993
Tsu05g03830 438 Gene3D - 139 426 IPR029052 -
Tsu05g03830 438 CDD MPP_PAPs 139 417 IPR041792 -
Tsu05g03830 438 SUPERFAMILY Purple acid phosphatase, N-terminal domain 42 137 IPR008963 GO:0003993|GO:0046872
Tsu05g03830 438 SUPERFAMILY Metallo-dependent phosphatases 141 405 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03830 Tsu-Chr5 49413540 49416803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03830 48 428 Miscellaneous Gene Families AT2G03450 25.714 4.88e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03830 K22390 - gmx:100787977 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03830 05 49413540 49416803 Tsu05g03830 05 49413540 49416803 ECH