Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03827 ATGTCACATGAAAAATCCAAAAGACCAATTTGTCCTTCATGTTCCAAACCCACTCGAACTTGTCTCTGTTCTCGAATCCTCACTCCTCCAATCCCTAATTCCGTCAATGTAACCATTCTTCAACACGCTCTTGAGTCTAATCATCCACTTAATTCTACCAGAATTGCTAAAATGGGTCTCAACAATCTCACTATTGCCACTGTTTCTGATGTTAATTTTCAATCTCAATTCTTTATTCACTTATTCGATCCCAAATTATCAAAATGTTTGTCTTCTGATGAAATTGAAGATGCCCATGATTTGTTTTGTGATAAAGATTCAAACTtgattgatattgatattgatagTGCTGGTTTGAAAAATCATGTTGAAGATGTTATTTTCAATAATTCTAGTGTTGAAACTGTGAACCAAGTGAATGATGATGGTCTTGTTGTTGTGAATGATGAAGTTAAGAAAATTCCAATTCGTCGAAATTGTGATGATGTAACTATAGGTTATGCAGGACCTGCTATTAGTGTTACTATTGACAAATATGGTTCAATTACTTCATTGTCTCATATTTGGATGCAGCGATGTGAATCTCATGAGTTAggttttgacaatattttgtcTTGTGTTGAAGCACGTGAAGCACTCTCAAAAGGGTTTTCAGTGAAGAAGTTGCAAAGGAAGAAGTTGAATGGGGAAGAAAATgttgaagaatatgaagaatTTGAGCTTGAGATTTGTCCTGGATCGGTTCTGCTTTTTCCTTCTGATAATGCTGTTAGTATTAGTGATTTAAATGATGTTGGTTTTGAGGTGAAGAACTTGATTGTTCTTGATGGAACATGGGCTAAGGCTAAAAGGATTTATAGTGAAAACCCTTGGTTGAACATTTTACCACATTTGAAGTTGGAAGTGAATGAAATGAGCTTATATGGTGAAGTGAGGAATCAGCCTAAAGCTGGTTATTTGTCTACCATTGAGAGCGTTGTGTTTGCTTTGAAGGCAGTTGGAGAGAATCACGAGGGTTTGGATAGTCTCTTGGATACTTTTGAGTGCATGGTTGATGACCAAAGGCGGTGTAAAGACGAGAGACTGAGCAAACTGTTACCTAGTTGA 1107 0.3496 MSHEKSKRPICPSCSKPTRTCLCSRILTPPIPNSVNVTILQHALESNHPLNSTRIAKMGLNNLTIATVSDVNFQSQFFIHLFDPKLSKCLSSDEIEDAHDLFCDKDSNLIDIDIDSAGLKNHVEDVIFNNSSVETVNQVNDDGLVVVNDEVKKIPIRRNCDDVTIGYAGPAISVTIDKYGSITSLSHIWMQRCESHELGFDNILSCVEAREALSKGFSVKKLQRKKLNGEENVEEYEEFELEICPGSVLLFPSDNAVSISDLNDVGFEVKNLIVLDGTWAKAKRIYSENPWLNILPHLKLEVNEMSLYGEVRNQPKAGYLSTIESVVFALKAVGENHEGLDSLLDTFECMVDDQRRCKDERLSKLLPS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03827 368 PANTHER UNCHARACTERIZED 1 364 IPR039262 -
Tsu05g03827 368 Coils Coil 219 239 - -
Tsu05g03827 368 Pfam DTW domain 8 355 IPR005636 -
Tsu05g03827 368 SMART DTW_2a 7 359 IPR005636 -
Tsu05g03827 368 PANTHER DTW DOMAIN-CONTAINING PROTEIN 2 1 364 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03827 - - mtr:MTR_5g092280 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03827 05 49407198 49408304 Tsu05g03827 05 49407198 49408304 ECH