Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03799 ATGATGGTAGAGATTTTTCTAAGATCATCACCTCATCTACTTTACTATACTTCTTCATCTCCTCCTCCCATTCATCATCATAGACAATGCAGAAGAGTGTCAAGAAAAACACAGTTGAAATGCTCACTAGATCTTCCAAGTAAAGTTCTGACCAAACATGTCTTATCTGGTCTTGCTGCTACTTTGATATTTATCTCTCCACCAAATCAGTCTATAGCAGCAGATCTATCTTCTCGGCAACAAAATATATGCCAGCTTGCTAGTGCCAGTGAAAGTGCAGTTAGTTCACCATTTGAGAATGAATCCAATGAAAATCTAATGATGATGAGAGGTATGACAGCCAAGAACTTTGACCCTATCAGATATTCAGGAAGATGGTTTGAAGTTGCTTCGCTCAAACGTGGCCAAGAAGACTGTCATTGCACACAGGGTGTGTATACATTTGATAGGGAAAAACCAGCTATCCAAGTTGATACATTTTGTGTTCATGGGAGCCCTAATGGATATATAACTGGCATTAGGGGAAGGGTTCAATGTCTTTCACTAGAAGATATGGAGAAAAGTGAGACAAAACTTGAGATGCAAGAGATGATCAGAGAAAAATGCTTTCTCCGGTTTCCTACATTGCCATTCATTCCCAAGTTGCCTTATGATGTCATTGCTACTGATTATGACAATTTTGCTCTTGTTTCTGGAGCTAAGGACACAGGTTTTGTTCAGATATACTCAAGGACACCTAACCCTGGAACTGAATTTATAGAGAAATACAAAGCATACCTTGCAAATTATGGATATGATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATACTCAAGGACACCTAACCCTGGAACTGAATTTATAG 1044 0.3123 MMVEIFLRSSPHLLYYTSSSPPPIHHHRQCRRVSRKTQLKCSLDLPSKVLTKHVLSGLAATLIFISPPNQSIAADLSSRQQNICQLASASESAVSSPFENESNENLMMMRGMTAKNFDPIRYSGRWFEVASLKRGQEDCHCTQGVYTFDREKPAIQVDTFCVHGSPNGYITGIRGRVQCLSLEDMEKSETKLEMQEMIREKCFLRFPTLPFIPKLPYDVIATDYDNFALVSGAKDTGFVQIYSRTPNPGTEFIEKYKAYLANYGYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTQGHLTLELNL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03799 347 PANTHER CHLOROPLASTIC LIPOCALIN 27 267 - -
Tsu05g03799 347 Coils Coil 265 266 - -
Tsu05g03799 347 Pfam Lipocalin-like domain 120 267 IPR000566 -
Tsu05g03799 347 PANTHER LIPOCALIN 27 267 IPR002345 GO:0036094
Tsu05g03799 347 Gene3D - 112 274 IPR012674 -
Tsu05g03799 347 SUPERFAMILY Lipocalins 113 267 IPR012674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03799 Tsu-Chr5 49203846 49206836 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03799 - - gmx:100787880 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03799 05 49203846 49206836 Tsu05g03799 05 49203846 49206836 ECH