Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03778 ATGGGTGTCCTTGGAGCAATAATAAGGCATTTGGACACAACGATAggGCCCGGAATAATGCTTCTTTATCCTTTATATGCATCAATGAGGGCAATTGAAAGTCCTTCAACCTTAGATGACCAACAGTGGCTAACTTATTGGGTTTTATACTCTTTCATAACACTCTTTGAGCTTTCAACTTATAGGATCCTATATTGgATTCCAATTTGGCCATACATGAAGCTTATGTTCTGCGTATGGTTGGTACTGCCAATGTTCAATGGAGCagcttatatatatgaaaattatgCGAGGAAATACTTCAAGAAATTTGGTAACTATGGAGGAGGATCCAATTATCCTGAGGAGTACAAGAAGATCCTTCATATGATGACTTTCGATGCAAGAAAAGCAGTTGAACGTTATATCGATAGATTTGGACCAGATTCATTTGAGAGAGTGATTAGAGCAGCTGAGAAAGAAGCAAAGAAGCATTGA 477 0.3669 MGVLGAIIRHLDTTIGPGIMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSFITLFELSTYRILYWIPIWPYMKLMFCVWLVLPMFNGAAYIYENYARKYFKKFGNYGGGSNYPEEYKKILHMMTFDARKAVERYIDRFGPDSFERVIRAAEKEAKKH 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03778 158 PANTHER HVA22-LIKE PROTEINS 4 109 IPR004345 -
Tsu05g03778 158 Pfam TB2/DP1, HVA22 family 24 100 IPR004345 -
Tsu05g03778 158 PANTHER HVA22-LIKE PROTEIN 4 109 IPR031117 GO:0009737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03778 Tsu-Chr5 49060815 49062210 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03778 K17279 - gmx:100779435 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03778 05 49060815 49062210 Tsu05g03778 05 49060815 49062210 ECH
Tsu07g01092 07 9272369 9274234 Tsu05g03778 05 49060815 49062210 PCT