Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03411 atggAGAATATTCAATCATGGGTTTCAAAACACAAGCTCGCCACAGTTGGAGGACTTTGGGCATCTGGAATTGGAGCAACACTTCTAACATATTCACGTACAAGGTCTCCAATGAAGCCAAGTCTTAGGCTAATTCATGCTAGGATGCATGCTCAAGCATTAACATTGGCAGTGTTATCCGGTGCTGCAGCTTATCACTATTATGAAAATCGCGTTGAAGAGTCAAAACCACGTTCGGAGGGACATGGATCAAGTTTGGTCCAAATGAATGAGTGGGAGCTTCTTTgtccattttaa 297 0.4108 MENIQSWVSKHKLATVGGLWASGIGATLLTYSRTRSPMKPSLRLIHARMHAQALTLAVLSGAAAYHYYENRVEESKPRSEGHGSSLVQMNEWELLCPF 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03411 98 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 3 80 IPR040153 -
Tsu05g03411 98 Pfam Hypoxia induced protein conserved region 11 61 IPR007667 -
Tsu05g03411 98 ProSiteProfiles HIG1 domain profile. 1 77 IPR007667 -
Tsu05g03411 98 Gene3D - 13 73 - -
Tsu05g03411 98 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 3 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03411 Tsu-Chr5 45412113 45413136 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03411 - - gmx:100500345 139.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01934 03 20024570 20025021 Tsu05g03411 05 45412113 45413136 PCT