Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03330 ATGAATCGTAGTTTCAGAGCTACGGAATCGCAAATGCGAACTGCGTTAAGGCAGAGTCAATTAGATGTTTTCAGATCGTCTTCGTTTGTCATTGACAGAGATGACGAGCTTGCATTGTTTCATCGGATGAAGAATTTTGAGAATGAGAATCATGATCTTCTGCTTCGTGATTCCACCGAGGAATTCGTTGATTCAGCATTTGGCTCAAATCCAAGGAGTTCTCGCTTATTTGACATTTCATCGTCGACTGATGCTCCTGTGCGTAAGACTGGAGCTGATGATTTTCTCAATTCTGAAATTGATAAGAATGATTATGAGTGGCTTCTAACCCCTCCTGGGACTCCCCTTTTTCCTTCTTTGGAGATGGAGACTAAAAAAACTGTTATGAGTCAGCTTGGTGCTTCAACCACACGTCCCATGGCACTAAAATCTAGATTGGCAAATCCTCCATCAGAGCATAGCAGAAGGACCAACTTGGTATCCAAGCAACAAGCTTCTTCTCCTGGGTTGAGCTCTTCAGGTGGGGGAACCAGGAGGCCCTTATCATCATCAGGGAATCCAGGATCAAGACCTGCAACTCCCACGGGACGGTCTACATTAACCACATCTTCAAAATCATCTAGACCTTCAACACCTACTTCTCGTACATCCATACCTTCAACACCTTCTCGTACATTCATACCTTCAACTAGGACAACCGTAGCCACTACCAAACCCGTTGTTTCTTCTATTAAGACTACAGTTCCTGTCATCAAAACTACTACAGTTCCTGCAGCTAGACCCACATTTCCTTCAGCTAAACTCACAGTTCCTTCAGCTAAACCCACAGTTCCTTCTAGGTCCTCTACACCCTTGTCAAAAAATACGACAAGATCTTCAACACCAACAAGCAGGCCTACCTTATCTACTTCTAAGCCTGCATCAAGGGCATCAACGCCTACTCGGCGACCATCCACACCATCAATTGCATCCAGCCTGTCTGCTCCTCCAGTTAAAACTTCTTCAATCTCCAAGCCAACTCCGGTGGTGTCAAAGCAGCCAGTACCATCACGTGGAACTTCACCCACAGTGAGATCAAGACCATTGAAGCCATCTGAGATGCCTGACTTTTCACTCGATGCTCCGCCCAATTTGAGGACCACACTTCCTGAAAGGCCGGTTTCAGCAACTAGAGGAAGACCTGGAGCACCCTCCACGCGCTCTTCGTCTATTGAGCATGTTTCTAGTGGCAGACCAAAGAGACAGTCATGCTCTCCTTCTAGAGGACGGCCTGCCAATGGAATTTCTTATATAAGTGGAAGCTCTATGCCTGCAGTGAATCGTGGATACTCCAAAGTAAATGACAAAGTCAGTCCTGTTGTAATGGGCACCAAAATGGttgagagagtaataaatatgAGAAAACTAGCACCTCCTAGGCCGGATGTCAAAAACTCTCCCCATAGTCTATCTGGCAAGTCAAATTCATCACCAGACAACTCTGGTTTCGGAAGAACACTCTCGAAGAAATCCTTGGATATGGCTCTGAGACATATGGATATAAGAAAAAGGCTTCCAGGAAATTTACGGCCATCGATGACAAACATTCCAGCTTCTTCAATGTATAGCGTGCGATCAGGACATCAGCGTGGCCTAACTGTTAGTGTCTCGGGTTCTCCACATGCGACTAGCAGTAATGCTGGTTCTGAACTGAGTGTAAACCAAAATGGTCTTTATTCAGATTATAGTGAAGTAGATTATTATGATATGGTGAGTGACAAAGGTGGTCAATCTCCTGTAAGTGTGCGGGGCAGGTACAAACCATCATACTGA 1812 0.4487 MNRSFRATESQMRTALRQSQLDVFRSSSFVIDRDDELALFHRMKNFENENHDLLLRDSTEEFVDSAFGSNPRSSRLFDISSSTDAPVRKTGADDFLNSEIDKNDYEWLLTPPGTPLFPSLEMETKKTVMSQLGASTTRPMALKSRLANPPSEHSRRTNLVSKQQASSPGLSSSGGGTRRPLSSSGNPGSRPATPTGRSTLTTSSKSSRPSTPTSRTSIPSTPSRTFIPSTRTTVATTKPVVSSIKTTVPVIKTTTVPAARPTFPSAKLTVPSAKPTVPSRSSTPLSKNTTRSSTPTSRPTLSTSKPASRASTPTRRPSTPSIASSLSAPPVKTSSISKPTPVVSKQPVPSRGTSPTVRSRPLKPSEMPDFSLDAPPNLRTTLPERPVSATRGRPGAPSTRSSSIEHVSSGRPKRQSCSPSRGRPANGISYISGSSMPAVNRGYSKVNDKVSPVVMGTKMVERVINMRKLAPPRPDVKNSPHSLSGKSNSSPDNSGFGRTLSKKSLDMALRHMDIRKRLPGNLRPSMTNIPASSMYSVRSGHQRGLTVSVSGSPHATSSNAGSELSVNQNGLYSDYSEVDYYDMVSDKGGQSPVSVRGRYKPSY 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03330 603 PANTHER PROTEIN, PUTATIVE-RELATED 1 184 - -
Tsu05g03330 603 MobiDBLite consensus disorder prediction 262 440 - -
Tsu05g03330 603 PANTHER PROTEIN, PUTATIVE-RELATED 184 598 - -
Tsu05g03330 603 MobiDBLite consensus disorder prediction 536 568 - -
Tsu05g03330 603 MobiDBLite consensus disorder prediction 272 360 - -
Tsu05g03330 603 MobiDBLite consensus disorder prediction 130 231 - -
Tsu05g03330 603 MobiDBLite consensus disorder prediction 480 499 - -
Tsu05g03330 603 PANTHER GASTRIC MUCIN-LIKE PROTEIN 184 598 - -
Tsu05g03330 603 PANTHER GASTRIC MUCIN-LIKE PROTEIN 1 184 - -
Tsu05g03330 603 MobiDBLite consensus disorder prediction 394 440 - -
Tsu05g03330 603 MobiDBLite consensus disorder prediction 151 231 - -
Tsu05g03330 603 MobiDBLite consensus disorder prediction 583 603 - -
Tsu05g03330 603 MobiDBLite consensus disorder prediction 467 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03330 Tsu-Chr5 44604389 44609126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03330 - - qsu:111990623 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01838 03 18903641 18908403 Tsu05g03330 05 44604389 44609126 ECH
Tsu05g03330 05 44604389 44609126 Tsu05g03330 05 44604389 44609126 ECH
Tsu03g01838 03 18903641 18908403 Tsu05g03330 05 44604389 44609126 PCT