Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03273 ATGGTTCCTTTGGGTTGGATAGGTGGTGTTGTTGGTTTAATTCTTGCAACTGCTATATCACTTTATGCAAATGCTCTTATTGCTATGCTTCATGAATTTGGTGGAACAAGACATATTAGATACCGTGATCTTGCTGGTTATATATATGGTAGAAAAGCGTATTGTCTCACATGGACTCTGCAGTATGTCAATCTTTTCATGATAAATACCGGCTACATCATTTTGGCTGGTTCGGCTTTGAAGGCCGTTTATGTTCTATTTAGGGATGATGACCAGATGAAACTTCCGCATTTTATTGCCATAGCTGGACTTGTATGTGCAATGTTTGCCATTTGTATTCCTCATCTTTCAGCTCTTGGAGTTTGGCTGGGATTTTCAACGGTCTTAAGCCTCGCATACATTGTCATAGCACTTGTACTGTCACTAAAAGACGGAATAAAAGCACCAGCTCGAGATTATAGTGTTCCGGGGACATCAACAAGTAAAATATTTACAACAATCGGGGCGTCTGCAAATCTTGTGTTCGCATATAATACAGGAATGCTTCCTGAGATACAGGCGACGATCAGACAACCAGTTGTCAAGAACATGATGAAAGCGCTATACTTTCAGTTTACAGTTGGAATTCTGCCATTATATCTGGTTACCTTTGCAGGGTACTGGGCATATGGATCTTCAACACAAACTTATTTGGTGAATAATGTTAAGGGTCCAATCTGGGTGAAGGCAGTGGCCAATATTACAGCCTTTCTTCAATCAATCATTGCATTGCATATATTTGCAAGTCCAATGTATGAGTATTTGGATACCAAACATGGGATCAAAGGGAGTGCTCTAGCTTTTAAGAACTTATCATTTAGAATCTTGGTAAGAGGTGGCTACATGACTTTGAATACATTTGTATCAGCTCTTTTGCCATTCCTTGGAGATTTCATGAGCCTCACAGGAGCTATAAGCACATTTCCCCTTACATTTATTCTTGCAAACCATATGTACCTAGTGGCAAATAAGAACAAACTAAATTCCATTCAAAAGCTTTGGCATTGGATCAACATTTGGTTCTTTGCAATCATGTCTGTTGCAGCAACTATTGCAGCGTTGCGGCTTATTGCTTTAGATTCCAAAACTTATCATGTTTTCGCCGATTTatga 1152 0.3915 MVPLGWIGGVVGLILATAISLYANALIAMLHEFGGTRHIRYRDLAGYIYGRKAYCLTWTLQYVNLFMINTGYIILAGSALKAVYVLFRDDDQMKLPHFIAIAGLVCAMFAICIPHLSALGVWLGFSTVLSLAYIVIALVLSLKDGIKAPARDYSVPGTSTSKIFTTIGASANLVFAYNTGMLPEIQATIRQPVVKNMMKALYFQFTVGILPLYLVTFAGYWAYGSSTQTYLVNNVKGPIWVKAVANITAFLQSIIALHIFASPMYEYLDTKHGIKGSALAFKNLSFRILVRGGYMTLNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLVANKNKLNSIQKLWHWINIWFFAIMSVAATIAALRLIALDSKTYHVFADL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03273 383 PANTHER OS05G0424000 PROTEIN-RELATED 1 378 - -
Tsu05g03273 383 Pfam Transmembrane amino acid transporter protein 1 366 IPR013057 -
Tsu05g03273 383 PANTHER PROLINE TRANSPORTER 1 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03273 Tsu-Chr5 44093657 44098636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03273 1 383 Organic Solute Cotransporters AT2G39890 77.807 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03273 - - gmx:100500168 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03273 05 44093657 44098636 Tsu05g03273 05 44093657 44098636 ECH
Tsu03g01779 03 18285074 18288513 Tsu05g03273 05 44093657 44098636 PCT