Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02622 ATGCGTGAGAAACTTGCCATACCAGAAGCAGAATGGCCTAGAGCCATTGGTGAGCTTTGTAATCTGAATCATATTGAAGAAGCAGCTGTTCTGAGCACATGCAACAGAATGGAGATATATGTAGTTGCTCTTTCTCAGCACCGCGGTGTCAAAGAAGTCACTGAATGGATGTCAAATACAAGTGGTATACCTGCATCAGAGCTTTCACAGTACCTATTTTTGCTATACAACAAAGATGCAACACATCACATTTTTGAAGTATCAGCAGGACTTGATTCTCTTGTAATGGGAGAAGGTCAAATCCTTGCACAAGTAAAGCAAGTTGTGAAAGCAGGACAAGGAGTTAATGGCTTTGGAAGAAACATCAGTGGTCTATTCAAACACGCAATCACCGTCGGTAAAAGGGTTCGAACTGAGACCAATATTGCGGCCGGCGCAGTTTCCGTGAGTTCAGCTGCGGTCGAATTGGCCTTGATGAAGTTACCTAATCAAGCCTCACAAGGCAATGCAAGAATGCTAGTTATTGGAGCTGGGAAAATGGGGAAGCTTGTGATTAAGCATTTAGTCGCAAAAGGGTGTAAAAAGATGGTAGTTGTTAATCGAAGCGAAGAGAGAGTAGCAGCGATCCGCGAAGAAATATGTGATGTTGAGATAATCTACAAACCTCTTTCGGAAATGTTCGAATGTGTTGGCGAAGCAGATGTAGTTTTCACCAGCACTGCATCAGAGAATCCTTTGATTTTGAAAGAACATGTTAAGGAACTTCCTTTAGCAAGCGAAGAAGTCGGATGCAAACGCCTCTTTGTCGACATTTCTGTTCCAAGAAACGTCGGTTCATGTGTCAATGATCTTGAGTCAGTGAAAGTTTACAATGTTGATGATCTTAAAGAGGTTGTGGCTGCTAACAAAGAAGATAGGTTAAGAAAAGCAATGGAAGCACAAGTGATCATTGACGAAGAATCGACACAATTTGAAGCATGGAGAGACTCATTAGAAACTGTTCCAACCATTAAGAAATTAAGGGCTTATGCTGAAAGATTAAGGGTAGCTGAGCTTGAGAAATGTTTAGGCAAAATGGGTGATGATATCAataagaaaacacaaaaagcaGTGGATGATCTTAGTAAAGGGATTGTGAATAAAATGCTTCATGGTCCAATGCAACATTTGAGATGTGATGGAAGTGATAGTAGGACTTTGAGTGAGACACTTGAGAATATGCATGCTTTGAATAGAATGTTTAGTCTTGAAACTGAGATTTCTGTTTTGGAACAGAAGATTAGAGCTAAGGTGGAGCAAAAACCATAG 1308 0.4021 MREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSNTSGIPASELSQYLFLLYNKDATHHIFEVSAGLDSLVMGEGQILAQVKQVVKAGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPNQASQGNARMLVIGAGKMGKLVIKHLVAKGCKKMVVVNRSEERVAAIREEICDVEIIYKPLSEMFECVGEADVVFTSTASENPLILKEHVKELPLASEEVGCKRLFVDISVPRNVGSCVNDLESVKVYNVDDLKEVVAANKEDRLRKAMEAQVIIDEESTQFEAWRDSLETVPTIKKLRAYAERLRVAELEKCLGKMGDDINKKTQKAVDDLSKGIVNKMLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEISVLEQKIRAKVEQKP 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02622 435 Gene3D - 146 299 - -
Tsu05g02622 435 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 312 416 IPR015896 GO:0008883|GO:0033014|GO:0050661
Tsu05g02622 435 Gene3D - 1 145 IPR036343 GO:0008883|GO:0033014|GO:0050661
Tsu05g02622 435 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 310 396 IPR036453 GO:0008883|GO:0033014|GO:0050661
Tsu05g02622 435 Pfam Shikimate / quinate 5-dehydrogenase 159 298 IPR006151 -
Tsu05g02622 435 PIRSF GluTR 1 432 IPR000343 GO:0008883|GO:0033014|GO:0050661
Tsu05g02622 435 TIGRFAM hemA: glutamyl-tRNA reductase 1 396 IPR000343 GO:0008883|GO:0033014|GO:0050661
Tsu05g02622 435 ProSitePatterns Glutamyl-tRNA reductase signature. 83 106 IPR018214 GO:0008883
Tsu05g02622 435 CDD NAD_bind_Glutamyl_tRNA_reduct 1 310 - -
Tsu05g02622 435 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 1 434 - -
Tsu05g02622 435 Hamap Glutamyl-tRNA reductase [hemA]. 1 414 IPR000343 GO:0008883|GO:0033014|GO:0050661
Tsu05g02622 435 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 145 306 IPR036291 -
Tsu05g02622 435 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 1 140 IPR015895 GO:0008883|GO:0033014|GO:0050661
Tsu05g02622 435 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 2 142 IPR036343 GO:0008883|GO:0033014|GO:0050661
Tsu05g02622 435 PANTHER GLUTAMYL-TRNA REDUCTASE 1 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02622 Tsu-Chr5 36036270 36039351 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02622 K02492 - gmx:100819951 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02622 05 36036270 36039351 Tsu05g02622 05 36036270 36039351 ECH