Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02610 ATGATTATTCGTGGAGAAAGTATGGTTAGAAAACAACCGTTAAAGGGATCACCGTATACAAGGGGTATTATAGGTGCTGAGTGTAACCTTCCTTCCCCTGTTTCTATATTGTTCATTCCCTGCCTCCAACCAATCACTCACTCATTTcgttttctcttcttcttcttttcagTTATGGATACTACAGCAGGTCAAAGTCTCTATCCATTGCACCAAAGCAAAACTATTCACCTGGTTAGGCATGCCCAAGGAGTTCATAATGTGGAAGGAGAGAAGAACCATGATGCTTACTTATCAGACGATCTTTTTGATGCAAACCTAACTCCTCTTGGCTGGAATCAGGTTGAAAATCTGCAAAAGCATGTGAAGGCTATTGGACTTTCTGGAAAAATTGAACTAGTTGTGGTTTCCCCATTGTTAAGGACAATGCAAACAGCAGTTGGAGTCTTTGGTGGGGAAGCACACACTGATGGAACTAATGAACCTCCTCTGATGATTGAAAATGTGGGACATAGTGATCATCCTGCAGTTTCTAGTCTTAACTGCCCACCATTTATTGCAGTAGAGCTTTGCCGAGAACAAATGGGTCTCCATCCTTGTGATAAGAGAAGAACTGTCAGTGAGTACCGTAACTTGTTTCCAGGAATTGATTTTTCGTTGGTCGAAACTAATGAAGATACTTGGTGGACACctgaaagagagaagaaagaagaagttATTGGTAGGGGACTGAAATTTTTGGAATGGTTGTGTACACGTAAAGAGAAGGAGATAGCTGTTGTTACACACAGCAGTTTTCTGTTTAATACTCTCAGTGCTTTTGGAAATGATTGTCACCCAAATATTAAGACTGAAATGTGTGCACACTTTGCTAATTGTGAACTACGCTCAATGGTTATTGTGGATAAAGGTATGGTTGGATCAAATAATTCAACTACCAACTATCCTGGCAAAATTCCTCATGGTCCGGATCTTCCTAGTGATGCTACTGACTAA 996 0.3865 MIIRGESMVRKQPLKGSPYTRGIIGAECNLPSPVSILFIPCLQPITHSFRFLFFFFSVMDTTAGQSLYPLHQSKTIHLVRHAQGVHNVEGEKNHDAYLSDDLFDANLTPLGWNQVENLQKHVKAIGLSGKIELVVVSPLLRTMQTAVGVFGGEAHTDGTNEPPLMIENVGHSDHPAVSSLNCPPFIAVELCREQMGLHPCDKRRTVSEYRNLFPGIDFSLVETNEDTWWTPEREKKEEVIGRGLKFLEWLCTRKEKEIAVVTHSSFLFNTLSAFGNDCHPNIKTEMCAHFANCELRSMVIVDKGMVGSNNSTTNYPGKIPHGPDLPSDATD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02610 331 Pfam Histidine phosphatase superfamily (branch 1) 76 148 IPR013078 -
Tsu05g02610 331 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 36 331 - -
Tsu05g02610 331 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 36 331 - -
Tsu05g02610 331 MobiDBLite consensus disorder prediction 311 331 - -
Tsu05g02610 331 Gene3D - 74 316 IPR029033 -
Tsu05g02610 331 SMART PGAM_5 75 270 IPR013078 -
Tsu05g02610 331 CDD HP_PGM_like 75 146 IPR013078 -
Tsu05g02610 331 SUPERFAMILY Phosphoglycerate mutase-like 74 309 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02610 Tsu-Chr5 35834496 35843690 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02610 - - mtr:MTR_5g067240 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02610 05 35834496 35843690 Tsu05g02610 05 35834496 35843690 ECH