Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02574 ATGATGAACGAGTTTCCTCCTAGGGTTTCGGAATCTCTCGATTCCATGGATGCATTTGATAATTCCTCTGTAAATTTCATATCGAACGAGTTTCTCGaCAAGTTCGATGTAAACGATTTTGATGGTATTTCTTGGGTTGATGTTGCTGGGGctgttgataattttaattttgagaaaGATGTGGACACAATGCATAACGCGTTAGGAAACATATTGGGAGACACACTTGATGATTACAAAAATAATTCCGAGACCACATTCCCAGATTTTCAGGAGCCTTTTGACGAACTTGTCTATCCAAAAGGGGACCCGGATGCTGTTTGCCTAAGTAAGAGAGATGTGGATCTATTACAACCAGATACATATATCAATGACACTATTATTGATTTTTACATTCTATATCTAAAGAATAAGATGAAAGAGCATGAAAAGGCTAGGTTCCACTTTTTCAATAGTTTTTTCTTTCCAAAGCTGGCTGGTATGGACAAGAATGCACCCTATGCTTGTGATGGCAAATTAGCGTTTCAAAGTGTTCGTAAATGGACAAGAAaagtaaatttgtttgaaaaagaTTATATTTTCATACCTGTGAACTTCAACTATCACTGGAGCTTAATAGTAATTTGTCATCCTGGGGAAGTGGATAATATTAATGACAAAGAGCCGGAAAAGTCACTTAAGCTACCCTGTATATTGCATATGGATTCTTACAAGGGATATCATAGTGGTTTGAAAGACCTTGTGCAAAGCTATTTGTGTGAAGAATGGAAAGAGAGGAAAAAGGATACATGTAGAGAAGACCTCTCATCAAGATTCTTGAATATGCCTTTTCTCCCAGTTGAGGTACCACAGCAGAAAAACTCGTATGACTGTGGCCTCTTTTTACTTCATTATCTAGAGCTCTTCCTGGATGAAGTTCCATCTGATTTCAATCCGTTGAGAATAACCAAGTTCTCCAACTTTCTCAATTCAGACTGGTTTCCACCTGCTGAGGCTTCTCTCAAGCGAACAGTTATACGTGGGTTAATATTTGAACTGGTGGAAAACGACGGTTCACATGAAGGCTTTTCCCTCGACAATGGTGATGACAGCCCCTGCTCAGAATATAATGACAACAGGATTGGTGGTCAGTGTCATTTAATCAACGGAGAGGCATTAACTTTCCATTCTGGCCGAGGAATAGAACTGGCTCCACCTTTCAATACTTCTAGTATGGTTCTTAAAGAGCATTTTGAACCAGGAACTACATTGGGAACTTCACTGAGACATTGCCAATCTTTTGAGCAGCGATCATCTAATCATTGTTTTAATGGTTCAATAATGGAGAAAGATAGAGATTTCAATGACCATCTTCAAGCAGAGCTTCTAAAGGCTGAATTACATACATCAAATTGTGCAACGGATGAATCCGATGACATAGAGATAATTGGAAATTTTCCAGTTAAAACAAATTCAAGATCATATCCGATGTCCGTAGAAAACATTCGGCGTTTACTAGATAATTGGTCACCAACTCCACAATTGCATCGAGTTTCTAATGTAGTAGATAACGAGGTCTTCAATGATGATGTTCAGATCATTGATAACATGAAACTGGATTTTTGGGAGGAGCAACCTGCAAAGAAGAGGCGGCTTATGCATTTTCCGGGTGGAAGTGATGGAATCCTTACCTTCATATGA 1680 0.3804 MMNEFPPRVSESLDSMDAFDNSSVNFISNEFLDKFDVNDFDGISWVDVAGAVDNFNFEKDVDTMHNALGNILGDTLDDYKNNSETTFPDFQEPFDELVYPKGDPDAVCLSKRDVDLLQPDTYINDTIIDFYILYLKNKMKEHEKARFHFFNSFFFPKLAGMDKNAPYACDGKLAFQSVRKWTRKVNLFEKDYIFIPVNFNYHWSLIVICHPGEVDNINDKEPEKSLKLPCILHMDSYKGYHSGLKDLVQSYLCEEWKERKKDTCREDLSSRFLNMPFLPVEVPQQKNSYDCGLFLLHYLELFLDEVPSDFNPLRITKFSNFLNSDWFPPAEASLKRTVIRGLIFELVENDGSHEGFSLDNGDDSPCSEYNDNRIGGQCHLINGEALTFHSGRGIELAPPFNTSSMVLKEHFEPGTTLGTSLRHCQSFEQRSSNHCFNGSIMEKDRDFNDHLQAELLKAELHTSNCATDESDDIEIIGNFPVKTNSRSYPMSVENIRRLLDNWSPTPQLHRVSNVVDNEVFNDDVQIIDNMKLDFWEEQPAKKRRLMHFPGGSDGILTFI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02574 559 Gene3D - 99 344 - -
Tsu05g02574 559 PANTHER ULP1 PROTEASE FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 70 463 - -
Tsu05g02574 559 PANTHER ULP1 PROTEASE FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 471 547 - -
Tsu05g02574 559 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 70 463 - -
Tsu05g02574 559 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 471 547 - -
Tsu05g02574 559 Pfam Ulp1 protease family, C-terminal catalytic domain 122 318 IPR003653 GO:0006508|GO:0008234
Tsu05g02574 559 Gene3D - 147 279 - -
Tsu05g02574 559 ProSiteProfiles Ubiquitin-like protease family profile. 107 302 IPR003653 GO:0006508|GO:0008234
Tsu05g02574 559 SUPERFAMILY Cysteine proteinases 99 347 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02574 Tsu-Chr5 35070329 35074647 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02574 K08596 - gmx:100800444 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02574 05 35070329 35074647 Tsu05g02574 05 35070329 35074647 ECH