Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02567 ATGGCTGTAACTGATGGCTACATGAATTTATTTGGTTTGATGAAGCAGagatttttaaatttcaagaATCAAAAGTACATTAAAGAGTTGGAGCATTTTCAATCACTTGCTGAAGCTCAATATCCAAAGTTTATGGTAATTGCTTGTGCAGACTCAAGGGTATGCCCCTCTAACATATTAGGATTCCAACCTGGTGAAGTCTTTATGATACGTAACATTGCCAATCTTGTGCCTATAATGAAGAATGGACCATCAGAGTGTAATGCTGCTCTTCAGTTTGCAGTAACTACTCTTCAGGTTGAGAATATATTAGTCATTGGTCATAGTAGTTGTGCTGGAATTGAAGCTCTAATGAGTATGGAAGAAGATACAGAACCAAGAAACTTCATACACAATTGGGTTACCAATGGGAAAGTTGCCAAATTGAAGACCAAAGCTACTGCATCTCATCTTAGCTTTGATCAACAGTGCAGATTCTGTGAGAAGGAATCAATTAACCAATCATTATTAAACTTGCTAAGTTATCCATGGATAGAAGATAGAGTGAGGAAGGAATTGCTTTGTATTCATGGAGGATATTATAATTTTTCCAATTGCTCGTTTGAGAAATGGACCCTTGATTTTAAAGAATGTAATGTTAATGAAGAAAGTAGCAGTTATGTtgtcaaagaaaaagaattCTGGAGCTGA 690 0.3464 MAVTDGYMNLFGLMKQRFLNFKNQKYIKELEHFQSLAEAQYPKFMVIACADSRVCPSNILGFQPGEVFMIRNIANLVPIMKNGPSECNAALQFAVTTLQVENILVIGHSSCAGIEALMSMEEDTEPRNFIHNWVTNGKVAKLKTKATASHLSFDQQCRFCEKESINQSLLNLLSYPWIEDRVRKELLCIHGGYYNFSNCSFEKWTLDFKECNVNEESSSYVVKEKEFWS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02567 229 CDD beta_CA_cladeB 17 204 IPR045066 GO:0004089|GO:0008270
Tsu05g02567 229 PANTHER CARBONIC ANHYDRASE 4 229 - -
Tsu05g02567 229 Gene3D Carbonic anhydrase 8 215 IPR036874 GO:0004089|GO:0008270
Tsu05g02567 229 Pfam Carbonic anhydrase 45 198 IPR001765 GO:0004089|GO:0008270
Tsu05g02567 229 SMART Pro_CA_2 37 205 IPR001765 GO:0004089|GO:0008270
Tsu05g02567 229 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 49 56 IPR015892 GO:0004089|GO:0008270|GO:0015976
Tsu05g02567 229 SUPERFAMILY beta-carbonic anhydrase, cab 6 211 IPR036874 GO:0004089|GO:0008270
Tsu05g02567 229 PANTHER CARBONIC ANHYDRASE 4 229 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02567 Tsu-Chr5 34926363 34929662 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02567 K01673 - gmx:100812124 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02567 05 34926363 34929662 Tsu05g02567 05 34926363 34929662 ECH