Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02554 ATGGCTTCAATTTCAACCATTTATTCATCTTCGCCAACACtcaattatcaaaataatcaaaaaaaccaaaacgCATTCGCTAATTCAATACGACGTCGTTCTCATCTCCCTATATACCAAACCCGACCTAAACTCTCCCCAACCCGCTCCGTCGCGCGCGAGGTTCCGACCGATCTCTCCGCCGTTTCATCAACAAACAACCACCGTCTCGAGAAAGAGCCACGGGCGTTATGGCGTCGTTACGTTGATTGGCTGTACCAACACAAAGAAATCGGGTTGTATCTGGATGTGAGTCGGGTCGGGTTTACCGATGAGTTTGTGCAAGAAATGGAGCCCCGATTTCAGGCGGCATTTAAAGCTATGGAGGATCTTGAGAAAGGTGCGATTGCGAATCCTGATGAAGGTCGTATGGTTGGACATTATTGGCTTAGGGATTCCAATCGTGCTCCTAATTCGTTTCTTAAGAATCAGATTGATAATACTCTTGATGCTATTTGTGGATTCGCTAATGATATCGTCTCTGGTAAGATTAAGCCTCCTTCATCGCCTGAGGGAAGGTTTACTCAGATACTTTCTGTTGGGATTGGAGGTTCTGCACTTGGACCACAGTTTGTTGCAGAGGCACTTGCTCCTGATAATCCTCCACTCAAGATAAGATTTATTGACAACACAGATCCTGCTGGCATTGATCATCAGATTGCACAACTTGGCCCTGAGCTAGCTTCGACACTTGTAATCGTGATTTCAAAGAGTGGAGGTACTCCTGAGACCAGAAATGGTTTGTTAGAAGTACAGAAGGCCTTTCGTGAAGCAGGATTGGATTTCCCAAAACAGGGTGTTGCTATAACACAAGAAAATTCTTTGTTGGATAATACTGCCAGAATTGAGGGATGGTTAGCAAGATTTCCCATGTTTGACTGGGTGGGAGGTAGGACGTCAGAGATGTCTGCAGTCGGCCTGCTTCCAGCAGCTCTGCAGACCATTGACATCAGAGAAATGCTTCTTGGTGCATCACTGATGGATGAGGCAAATAGGAGTACTGTGATAAAGAACAATCCTGCTGCTTTGCTGGCTTTATGTTGGTATTGGGCTACAGATGGTGTAGGATCCAAGGATATGGTTATCCTTCCTTACAAGGACAGCCTGTTATTATTTAGTAGATACTTGCAGCAACTGGTTATGGAATCTCTGGGCAAGGAATATGACTTGGACGGTAATCGGGTTAATCAAGGAATTAGTGTCTATGGAAATAAAGGAAGCACGGATCAACATGCCTATATTCAGCAACTGAGGGAAGGTGTGCACAATTTCTTTGCAACATTCATTGAGGTGCTACGTGATAGACCACCTGGTCATGATTGGGAGCTTGAACCAGGTGTTACCAGTGGTGACTACCTGTTTGGTATGCTACAGGGAACAAGGTCAGCTTTGTACTCTAATGACCGCGAATCTATCACAGTCACTGTGCAAGAAGTGACACCTAGATCTGTTGGAGCCCTTGTTGCACTCTATGAACGAGCAGTTGGAATATATGCCTCACTTGTCAACATAAATGCTTATCACCAGCCTGGTGTGGAGGCGGGTAAAAAAGCAGCAGGAGAAGTATTAGCACTTCAGAAGCGGGTTTTAGCAGTGCTAAATGAGGCAAGCTGCAAGGAGCCTGTTGAACCATTGACAATTGAAGAAGTAGCCGAACGTTGCCATGCTCCAGAAGATATTGAAGTAATTTACAAGATTATTGCTCATATGGCTGCCAATGACAGAGCACTAATTGCTGAAGGTAACTGTGGTTCTCCGCGGAGCGTCAAAGTTTTTCTGGGAGAGTGTAATGTTGATGAACTGTATGCATGA 1851 0.4446 MASISTIYSSSPTLNYQNNQKNQNAFANSIRRRSHLPIYQTRPKLSPTRSVAREVPTDLSAVSSTNNHRLEKEPRALWRRYVDWLYQHKEIGLYLDVSRVGFTDEFVQEMEPRFQAAFKAMEDLEKGAIANPDEGRMVGHYWLRDSNRAPNSFLKNQIDNTLDAICGFANDIVSGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQTIDIREMLLGASLMDEANRSTVIKNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEYDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTSGDYLFGMLQGTRSALYSNDRESITVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIEEVAERCHAPEDIEVIYKIIAHMAANDRALIAEGNCGSPRSVKVFLGECNVDELYA 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02554 616 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 616 IPR001672 GO:0004347|GO:0006094|GO:0006096
Tsu05g02554 616 CDD SIS_PGI_1 159 325 IPR035476 -
Tsu05g02554 616 Hamap Glucose-6-phosphate isomerase [pgi]. 90 539 IPR001672 GO:0004347|GO:0006094|GO:0006096
Tsu05g02554 616 Gene3D - 176 321 - -
Tsu05g02554 616 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 48 545 IPR001672 GO:0004347|GO:0006094|GO:0006096
Tsu05g02554 616 CDD SIS_PGI_2 371 535 IPR035482 -
Tsu05g02554 616 Gene3D - 322 521 - -
Tsu05g02554 616 Pfam Phosphoglucose isomerase 477 537 IPR001672 GO:0004347|GO:0006094|GO:0006096
Tsu05g02554 616 Pfam Phosphoglucose isomerase 120 446 IPR001672 GO:0004347|GO:0006094|GO:0006096
Tsu05g02554 616 MobiDBLite consensus disorder prediction 37 67 - -
Tsu05g02554 616 PRINTS Glucose-6-phosphate isomerase signature 378 399 IPR001672 GO:0004347|GO:0006094|GO:0006096
Tsu05g02554 616 PRINTS Glucose-6-phosphate isomerase signature 302 320 IPR001672 GO:0004347|GO:0006094|GO:0006096
Tsu05g02554 616 PRINTS Glucose-6-phosphate isomerase signature 498 512 IPR001672 GO:0004347|GO:0006094|GO:0006096
Tsu05g02554 616 PRINTS Glucose-6-phosphate isomerase signature 190 209 IPR001672 GO:0004347|GO:0006094|GO:0006096
Tsu05g02554 616 PRINTS Glucose-6-phosphate isomerase signature 480 498 IPR001672 GO:0004347|GO:0006094|GO:0006096
Tsu05g02554 616 PRINTS Glucose-6-phosphate isomerase signature 512 525 IPR001672 GO:0004347|GO:0006094|GO:0006096
Tsu05g02554 616 SUPERFAMILY SIS domain 68 539 IPR046348 GO:0097367|GO:1901135
Tsu05g02554 616 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 616 - -
Tsu05g02554 616 ProSitePatterns Phosphoglucose isomerase signature 2. 512 529 IPR018189 GO:0004347|GO:0006094|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02554 Tsu-Chr5 34736475 34746609 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02554 K01810 - gmx:100809452 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02554 05 34736475 34746609 Tsu05g02554 05 34736475 34746609 ECH