Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02516 ATGGATTCTGGTAATAGTGGAAGTATTTCTTCAAGTGGTGATGAAGAATATGATTCAAGAAATCATCATCAAACACTTCTACCTTCAAATTTCTTCAATCAACAACCTACCCTTCAATTTAATCCACAATCTTCTCTACAATCATTTAATCCTGCAGGCTCTTCCAATGTTTCTTTGTTTGATCTTTCACCAACCTACCttcaaaatctctctcaatCACAACCAAACATAACCTTTCCAATATCTCAAGGAGTTTCTTCATCATCACAACAAATCAATCAATGTTTGTTAGCAACTCCTAATCAAGATCTTGGAGTATTTCATGATGATAACAACAATGCAAGAGTGACACTTTCATCACCACAActaccatcatcatcaacagCTGCTACAACAAACAATGCTTCAAGAAATTCAAAGAAGAGAACAAGAGCTTCAAGAAGAGCACCTACAACAGTTCTAACAACCGACACTTCAAATTTCAGAGCTATGGTTCAAGAATTTACCGGTATCCCTGCACCGCCTTTTTCAGGAGGTAATTTTGGTGCAAAGTCACAATCACAACATGGAAATTTATCAGTAAATTCTCTTGAAGATCTTGGTGTGAATCAAGGACATCTTGGtcatcatgatgatgatgatggtggtggaaGCAGAAGAGACGTGTTAAGGTGTTTGGATCATGAGAATAGTTATGGTGGTAAAGTTGTTGGTTCTTCTTCATCAGGTGGTGGGGGTGTAGGTAGTAATTGTAAGGTTAACTTTTCAGGTTCTGTAGCAACCACGTTAAACCATGACAAGACAAtggagaataataataataatgataatgataatagtaataataataataataataataataataataatagaggAGAAGgtgctggtggtggtggtgttgatTCTTGGATTTGTTCTTCTGATAGGAATATTTTGTACATGGCAGACATCGAGGAACCTGTGGAGAGCCATCGGCTCGTCGACACTATTACGGATGAGAAATTGGCATGGGTTGCACCCGAGCCGCGGGGAGTGGCCTCCTCGATTGTATAG 1056 0.3362 MDSGNSGSISSSGDEEYDSRNHHQTLLPSNFFNQQPTLQFNPQSSLQSFNPAGSSNVSLFDLSPTYLQNLSQSQPNITFPISQGVSSSSQQINQCLLATPNQDLGVFHDDNNNARVTLSSPQLPSSSTAATTNNASRNSKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFSGGNFGAKSQSQHGNLSVNSLEDLGVNQGHLGHHDDDDGGGSRRDVLRCLDHENSYGGKVVGSSSSGGGGVGSNCKVNFSGSVATTLNHDKTMENNNNNDNDNSNNNNNNNNNNNRGEGAGGGGVDSWICSSDRNILYMADIEEPVESHRLVDTITDEKLAWVAPEPRGVASSIV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02516 351 MobiDBLite consensus disorder prediction 265 297 - -
Tsu05g02516 351 MobiDBLite consensus disorder prediction 109 139 - -
Tsu05g02516 351 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 189 IPR039609 -
Tsu05g02516 351 MobiDBLite consensus disorder prediction 109 152 - -
Tsu05g02516 351 MobiDBLite consensus disorder prediction 265 294 - -
Tsu05g02516 351 MobiDBLite consensus disorder prediction 1 23 - -
Tsu05g02516 351 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 189 - -
Tsu05g02516 351 Pfam VQ motif 148 175 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02516 Tsu-Chr5 34298295 34303727 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02516 - - mtr:MTR_5g063310 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02516 05 34298295 34303727 Tsu05g02516 05 34298295 34303727 ECH