Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02495 ATGTCTAGGCCTCTACATCGAGGTGTGTCTGGTATTCGTGTACCTGACAGTATACATGATGATACATGGGACTCACAATCCAAAGACAAAtcagaaaaagatgattttgatAAAAGGGGTTCTTCAGATCACACCCCTTTAGCATTGAAGTCTCCTTTGAAGTTGTTGTTTTCAGATAAAGAGAATGGTTTTACATCTGATCCATTCATTGTTGGAACACCAAGAAGCCGTTTTAAGTTGCTGTTGTTTTCATTgaagtttagtttagtttttataGTTGTTCTTGCTCTTGTTGGATCTTTTTGGTGGACTTTGAATTTGTCATCTTCATCAAGAGTTCGTGTTTATCATGGTTATAGGAGACTCCAAGAGAAATTAGTTTCTGATTTGTTGGATATTGGTGAGATTTCTAGGGGTGTTTCAAGGTGGAAAGAACTGGAATCTTGTTCTCCTGAATTGGAAAATTTTGTTCCTTGCTTTAATGTTTCTCATGAAAATGGGTTTGAAAGAAAATGTGAATATGAGCAGAGGCAGAATTGTTTGGTTCTGCCACCAGTCAATTACAAAGTTCCTCTTAGGTGGCCTACTGGAAAAGATGTTATTTGGGTTGCTAATGTGAAAATCACTGCACAAGAGGTGCTTTCTTCTGGAAGCTTGACCAAGAGGATGATGATGTTGGATGAAGAACAAATTTCCTTTCGTTCAGCGTCTCATATGTTTGATGGAGTTGAAGACTACTCACATCAAATTGCTGAAATGATTGGACTTAGAAATGAATCTTCCTTCATACAAGCTGGGATTCGAACCGTACTAGACATAGGTTGTGGCTATGGTAGCTTTGGAGCACACCTCTTGGACAGTCAACTTTTGACCTTGTGTATTGCAAACTATGAGCCTTCTGGTAGTCAAGTTCAGCTTACTCTCGAGCGAGGCCTTCCTGCTATGATTGCTTCTTTTACTTCAAAACAGTTGCCCTATCCATCTCTGTCCTTTGATATGTTACATTGTGCAAGATGTGGCATTGATTGGGACCAGAAAGATGGCAATCTCTTGATTGAAGCTGATAGACTTTTAAGACCGGGCGGATACTTTGTTTGGACATCACCGCTTACAAATGCTCGTAACAAGGAGAATCAGAAAAGGTGGAATTTTGTACATGACTTTACAGAAAATCTATGCTGGGAGATGCTATCACAGCAAGATGAAACTGTTGTATGGAAGAAAGCAAGTAAAAAGAGTTGTTATGCTTCAAGAAAGCGTGGCTCTCGACCTTTGTGTGGTAGAGGTCTTGATGTGGAGTCTCCATATTATCGTGAACTGCAAAACTGCATAGGAGGAACGCAGAGCAGTCGTTGGATTTCTATTGAAAAAAGGGGAAAATGGCCTTCTCGGGCTAATTTGAACAAGAATGAGCTAGCCATACATGGATTGCTGCCTGATGAATTTGCTGAGGACTCTGATAGCTGGAAAGCAGCGGTCCAAAACTATTGGTCACTTTTGTCTCCTCTAATATTTTCTGATCACCCGAAGAGGCCCGGTGACGAGGACCCTTCCCCGCCTTATAACATGTTCAGAAATGTGCTAGACATGAATGCTAATTTTGGTGGCTTTAATTCTGCATTGTTGCAAGCTAGAAAGTCTGTGTGGGTAATGAATGTGGTCTCAATAAGTGGATCCAACTATCTTCCCTTGATCCATGACAGAGGTTTTGTCGGCGTTTTACATGACTGGTGTGAGCCGTTTCCGACATACCCACGAACATACGACTTGGTGCATGCAGCAGGGCTTCTATCCCTTGAATTTTCCCAgccgcgcaggtgcaccatgcTTGATATGTTCATTGAAATTGATAGGTTACTTCGCCCAGAGGGTTGGTTTATAATTCGCGACACAGTTCCTTTAGTTGAATCAGCTAGAGCTCTAACAACACAGCTGAAGTGGGAAGCAAGAGTGATAGAAATCGAAAGTAACAGCGAGGAGAAACTCCTGATTTGCCAGAAACCTTTCTTTAAGAGACATGCAATCTAA 2028 0.4009 MSRPLHRGVSGIRVPDSIHDDTWDSQSKDKSEKDDFDKRGSSDHTPLALKSPLKLLFSDKENGFTSDPFIVGTPRSRFKLLLFSLKFSLVFIVVLALVGSFWWTLNLSSSSRVRVYHGYRRLQEKLVSDLLDIGEISRGVSRWKELESCSPELENFVPCFNVSHENGFERKCEYEQRQNCLVLPPVNYKVPLRWPTGKDVIWVANVKITAQEVLSSGSLTKRMMMLDEEQISFRSASHMFDGVEDYSHQIAEMIGLRNESSFIQAGIRTVLDIGCGYGSFGAHLLDSQLLTLCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCARCGIDWDQKDGNLLIEADRLLRPGGYFVWTSPLTNARNKENQKRWNFVHDFTENLCWEMLSQQDETVVWKKASKKSCYASRKRGSRPLCGRGLDVESPYYRELQNCIGGTQSSRWISIEKRGKWPSRANLNKNELAIHGLLPDEFAEDSDSWKAAVQNYWSLLSPLIFSDHPKRPGDEDPSPPYNMFRNVLDMNANFGGFNSALLQARKSVWVMNVVSISGSNYLPLIHDRGFVGVLHDWCEPFPTYPRTYDLVHAAGLLSLEFSQPRRCTMLDMFIEIDRLLRPEGWFIIRDTVPLVESARALTTQLKWEARVIEIESNSEEKLLICQKPFFKRHAI 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02495 675 Gene3D Vaccinia Virus protein VP39 225 412 IPR029063 -
Tsu05g02495 675 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 161 667 IPR004159 GO:0008168
Tsu05g02495 675 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 484 634 IPR029063 -
Tsu05g02495 675 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 15 673 - -
Tsu05g02495 675 MobiDBLite consensus disorder prediction 13 44 - -
Tsu05g02495 675 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 15 673 IPR004159 GO:0008168
Tsu05g02495 675 MobiDBLite consensus disorder prediction 1 44 - -
Tsu05g02495 675 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 264 414 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02495 Tsu-Chr5 33937355 33943338 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02495 K23870 - gmx:100805992 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02495 05 33937355 33943338 Tsu05g02495 05 33937355 33943338 ECH
Tsu02g03149 02 35124688 35129604 Tsu05g02495 05 33937355 33943338 PCT