Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02490 ATGGTTTCTCATGTTGTGTGCATCCCATATCCAGCACAAGGTCACATAAATCCAATGCTTAAATTAGCAAAACTTCTTAATTTCAAAGGTGGTTTTCATGTTACATTTGTTAACACAGAATTCAATCACAAACGTCTTCTAAAAGCTAGAGGTCCTAATTCTCTCAATGGCCTCCCATCATTTCGTTTTGAAACTATTCCTGATGGTCTTCCTGAGTCCGATGTGGATGCCACACAGGATATTCCTTCCTTGTGTGAGTCTACTAGAAAAACTTGCTTACCTCACTTTAAAAATCTTCTTTCAAAACTTAATAATGCTATAGACACCCCACCTGTTACTTGCATAGTTTCTGATGGTGCTATGACATTTACATTGGATGCTGCTCAAGAACTTGGTATCCCTGAGGTGCTTTTTTGGACAACTAGTGCTTGTGGCTTCATGTGCTACATGCAACATCATCAACTCATTGAAAAAGGCTTAATACCACTCAAAGATTCTAGTTATATCACAAATGGATATTTAGAGACTACCATAAATTGGGTGCcaggcatcaaagaaattcgaTTAAAGGATATCCCAAGCTTTTTCAGAACTACAAACCCAAATGATATTATGCTTAATACTTTAATATGGGAGTGCACAAGAGCTCAAAAAGCTTCGGCAATCATTTTTAACTCATTTGATAATCTAGAGCACAACATTTTAGAAGCATTCTCTTCCATTAATTTGCCTCCTATTTATTCCATTGGTCCTTTACATTTACTCTTAAAAGATATCACTCATAAGGAATTGAAGTCAATTGGGTCCAACCTTTGGAAAGAAGAGACAGAGTGTTTGGATTGGCTAAACAAAAAAGAACCCAACACTGTTGTTTATGTCAATTTTGGAAGTATCACTGTTATGACAAGTGAACAATTGATTGAGTTTGCTTGGGGACTAGCTAACagtaaaaaatcatttttgtggGTAATAAGACCAGATCTTGTGGCTGGAGAAAATGCTGTTTTACCTCAAGAGTTTATGGAAGAGACTAAAAATAGAGGATTATTGTCAAGTTGGTGTCCACAAGAGGAAGTGTTGACTCATTCAGCAATTGGTGGGTTTTTGACACATAATGGTTGGAATTCAACTTTGGAAAGTTTGTGTGGCGGTGTTCCAATGATATGTTGGCCTTTTTTTGCAGAACAACAAACAAATTGTAGATTTTGTTGTAATGAATGGGAGATTGGTTTGGAGATTGAAGATGCTAAGAGGGATAAAATAGAGGATCTTGTGAGGGAATTGATGGATGGAGAAAAGGGTAAAGAGATGAAAGAGAAAGTTTTACAATGGAAGAAATTGGCACAAAATGCTGTTTCTAGTCCACACGGATCATCCTTTGTGAATCTCAAGAATCTCTTTTGTGATGTTCTATTGTGA 1419 0.3566 MVSHVVCIPYPAQGHINPMLKLAKLLNFKGGFHVTFVNTEFNHKRLLKARGPNSLNGLPSFRFETIPDGLPESDVDATQDIPSLCESTRKTCLPHFKNLLSKLNNAIDTPPVTCIVSDGAMTFTLDAAQELGIPEVLFWTTSACGFMCYMQHHQLIEKGLIPLKDSSYITNGYLETTINWVPGIKEIRLKDIPSFFRTTNPNDIMLNTLIWECTRAQKASAIIFNSFDNLEHNILEAFSSINLPPIYSIGPLHLLLKDITHKELKSIGSNLWKEETECLDWLNKKEPNTVVYVNFGSITVMTSEQLIEFAWGLANSKKSFLWVIRPDLVAGENAVLPQEFMEETKNRGLLSSWCPQEEVLTHSAIGGFLTHNGWNSTLESLCGGVPMICWPFFAEQQTNCRFCCNEWEIGLEIEDAKRDKIEDLVRELMDGEKGKEMKEKVLQWKKLAQNAVSSPHGSSFVNLKNLFCDVLL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02490 472 CDD GT1_Gtf-like 4 456 IPR002213 GO:0008194
Tsu05g02490 472 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 466 - -
Tsu05g02490 472 PANTHER GLYCOSYLTRANSFERASE 3 51 - -
Tsu05g02490 472 PANTHER GLYCOSYLTRANSFERASE 52 465 - -
Tsu05g02490 472 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 60 436 IPR002213 GO:0008194
Tsu05g02490 472 Gene3D Glycogen Phosphorylase B; 273 450 - -
Tsu05g02490 472 Gene3D Glycogen Phosphorylase B; 4 453 - -
Tsu05g02490 472 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 3 51 - -
Tsu05g02490 472 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 52 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02490 Tsu-Chr5 33826862 33831946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02490 4 472 Glycosyltransferase AT1G22380 64.619 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02490 - - gmx:100784251 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02490 05 33826862 33831946 Tsu05g02490 05 33826862 33831946 ECH